Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1185 ATGGGCTGGGTAGACAAACTCACTGGCCTAACTGCACGGCTCCAGAAAATTTTGAGGGAATTGGACTTTTCATTTGCAATTGATATCACTCAAGATCACATTAAGGCAGTGGTCATGAATATATTTGTAGGAGGAACTGATACAATTGCAGCCATCTTGGTCTGGGCAATGACAGCTCTAATGAAGGATCCAATAGTGATGAAGAAAGCCCAAGAAGAAATCAGAAATATAGGAGGAAAGAAGGGCTTTAGAGATGAAGATGATATTGAGAAGCTTCCTTATCTCAAGGCATTAACCAAGGAGACAATGAAATTGCATCCACCCATTCCATTGATACCGCGAGCAACACCTGAAAATTGCAGTGTCAATGGGTGTGAGGTACCACCAAAAACCCTAGTGTTTGTGAATGCATGGGCAATTGGAAGGGATCCTGAATCCAGGGAAAACCCCCACGAGTTCAACCCTGAGCGATTTTTGGGTACTTTTATCGACTTCAAAGGACAACATTATGGGCTAATGGCCTTTAGGGCTGGCCGACGAGGTTGTCCTGGAATATATCTTAGAACTGTGATTATTCAGCTTGCCCTAGGTAATCTTCTTTATTCATTTGACTGGGAAATGCCTAATGGTATGACCAAAGAAGACATAGACACCGACGTGAAACATGGTGTCACAATGCTGTTAAATTTCATCAACTTTCTATCAAAAATTTGTATATGGAATCAATTTAATAATTTATGCTATGTCATTTTTCCATTTTCCATAATAATTTTGTTTTTTCTCGTTGCTTCAATAATTAACAGGGACACTTCACGGGACAACTTGGCCAACTTGCTGGAAACATCCTTGGAGGTTTCCGCCAGTTGCGGTTTAGTGGTGTATCAATTACCATGTGGAAGCTCAAACGATGGAAGTTACGTGTCCACGAGACACAGAAAAATATATGAATTGCTTCAATAA 960 0.4052 MGWVDKLTGLTARLQKILRELDFSFAIDITQDHIKAVVMNIFVGGTDTIAAILVWAMTALMKDPIVMKKAQEEIRNIGGKKGFRDEDDIEKLPYLKALTKETMKLHPPIPLIPRATPENCSVNGCEVPPKTLVFVNAWAIGRDPESRENPHEFNPERFLGTFIDFKGQHYGLMAFRAGRRGCPGIYLRTVIIQLALGNLLYSFDWEMPNGMTKEDIDTDVKHGVTMLLNFINFLSKICIWNQFNNLCYVIFPFSIIILFFLVASIINRDTSRDNLANLLETSLEVSASCGLVVYQLPCGSSNDGSYVSTRHRKIYELLQ* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1185 319 PRINTS P450 superfamily signature 97 108 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1185 319 PRINTS P450 superfamily signature 173 182 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1185 319 PRINTS P450 superfamily signature 44 61 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1185 319 SUPERFAMILY Cytochrome P450 27 227 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1185 319 Pfam Cytochrome P450 29 220 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1185 319 PANTHER CYTOCHROME P450 71B11-RELATED 24 226 - -
Vvi18g1185 319 Gene3D Cytochrome P450 5 231 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1185 319 PRINTS E-class P450 group I signature 33 50 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1185 319 PRINTS E-class P450 group I signature 136 160 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1185 319 PRINTS E-class P450 group I signature 53 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1185 319 PRINTS E-class P450 group I signature 96 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1185 319 PRINTS E-class P450 group I signature 182 205 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1185 319 PRINTS E-class P450 group I signature 172 182 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1185 Vvi-Chr18 11784344 11785492 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1185 2 226 Cytochrome P450 AT4G31500 41.985 2.46e-66 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1185 - - vri:117905408 443.351