Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1183 ATGATGATATTGCTTCTTATCCTTTTAGCTCTCCCTCTCTTCCTCTTGTTTCTTCTTCGAAACCAAAGAAGAGCGCCCCTTCCACCAGGTCCTCCAGGGCTGCCCTTTATTGGAAACTTGCTCCAGCTTGATAAATCAGCTCCTCATCTCTACCTATGGCGACTTTCTAAACAATATGGCCCCCTCATGTTCTTGCGCCTTGGTTTCGTGCCAACCCTAGTTGTTTCTTCGGCAAGAATGGCAAAAGAGGTCATGAAAACACATGATCTTGAATTTTCTGGTAGGCCTTCCTTGCTTGGTCAACAGAAGTTATTCTACAATGGCCTCGGTTTGACCTTTACCCCATATAATGATTATTGGAGAGAAATGAGGAAGATTTGTGTCCTCCATCTTTTCAACTCTAAAAGGGTGCAATCCTTTCGTTACATACGGGAAGATGAGGTTCTGGAAATGATTAAAAAGATTTCCAAGTTTGCTTCTGCTTCCAAGCTCACCAACTTAAGCGAGATCTTAATTCCTCTCACAAGCACCATAATCTGCAGGGTTGCGTTCGGTAAGAGGTACGATGATGAAGGATGTGAAAGAAGTAGATTTCATGAACTCCTAGGTGGAATTCAGACCATGGCGATAGCCTTCTTTTTCTCGGACTATTTTCCTTTAATGAGCTGGGTCGACAAACTCACAGGCATGATTTCTAGGCTCGAGAAAGTTTCCGAGGAATTGGATTTGTTTTGTCAAAAAATCATTGATGAGCACCTGGATCCAAATAAACCAATGCCTGAGCAGGAAGACATCACTGATATCTTGCTTAGACTGCAGAAGGATCGTTCGTTTACAGTTGATCTCACTTGGGATCACATTAAAGCTATCCTCATGGACATATTTATCGCAGGAACAGATACAAGTGCGGCCACTCTGGTTTGGGCGATGACAGAACTAATGAAGAATCCCATAGTGATGAAGAAAGCACAAGAAGAATTCAGAAATTCAATCGGAAAGAAGGGCTTTGTGGATGAAGATGATCTTCAGATGCTTTGTTATCTCAAAGCACTAGTGAAGGAGACGATGAGATTGCATCCTGCAGCTCCATTGCTGGTCCCGCGAGAAACACGTGAAAAGTGTGTGATAGATGGGTATGAGATAGCACCCAAAACCCTCGTGTTTGTGAATGCATGGGCCATTGGAAGAGATCCTGAGTTCTGGGAAAACCCAGAAGAGTTCATGCCTGAGAGATTCTTGGGTTCTTCCATAGACTTCAAAGGACAGGATTACCAATTCATACCTTTTGGAGGAGGACGAAGAGCTTGCCCAGGGTCACTGCTAGGAGTTGTGATGGTGGAGCTGACACTAGCTAATCTTCTTTACTCATTCGACTGGGAAATGCCTGCTGGGATGAACAAGGAAGACATAGACACCGACGTCAAACCTGGTATCACAGTGCACAAGAAGAATGCTCTTTGCCTGTTGGCTAGGAGCCATACCTGA 1485 0.4418 MMILLLILLALPLFLLFLLRNQRRAPLPPGPPGLPFIGNLLQLDKSAPHLYLWRLSKQYGPLMFLRLGFVPTLVVSSARMAKEVMKTHDLEFSGRPSLLGQQKLFYNGLGLTFTPYNDYWREMRKICVLHLFNSKRVQSFRYIREDEVLEMIKKISKFASASKLTNLSEILIPLTSTIICRVAFGKRYDDEGCERSRFHELLGGIQTMAIAFFFSDYFPLMSWVDKLTGMISRLEKVSEELDLFCQKIIDEHLDPNKPMPEQEDITDILLRLQKDRSFTVDLTWDHIKAILMDIFIAGTDTSAATLVWAMTELMKNPIVMKKAQEEFRNSIGKKGFVDEDDLQMLCYLKALVKETMRLHPAAPLLVPRETREKCVIDGYEIAPKTLVFVNAWAIGRDPEFWENPEEFMPERFLGSSIDFKGQDYQFIPFGGGRRACPGSLLGVVMVELTLANLLYSFDWEMPAGMNKEDIDTDVKPGITVHKKNALCLLARSHT* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1183 494 FunFam Cytochrome P450 83B1 15 489 - -
Vvi18g1183 494 PRINTS E-class P450 group I signature 390 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1183 494 PRINTS E-class P450 group I signature 56 75 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1183 494 PRINTS E-class P450 group I signature 426 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1183 494 PRINTS E-class P450 group I signature 286 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1183 494 PRINTS E-class P450 group I signature 349 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1183 494 PRINTS E-class P450 group I signature 80 101 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1183 494 PRINTS E-class P450 group I signature 436 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1183 494 PRINTS E-class P450 group I signature 306 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1183 494 PRINTS E-class P450 group I signature 174 192 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1183 494 PRINTS P450 superfamily signature 350 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1183 494 PRINTS P450 superfamily signature 427 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1183 494 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1183 494 CDD CYP71-like 58 486 - -
Vvi18g1183 494 Gene3D Cytochrome P450 17 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1183 494 Pfam Cytochrome P450 28 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1183 494 PANTHER CYTOCHROME P450 71B11-RELATED 15 491 - -
Vvi18g1183 494 SUPERFAMILY Cytochrome P450 28 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1183 494 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 429 438 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1183 Vvi-Chr18 11774368 11775969 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1183 2 493 Cytochrome P450 AT4G31500 47.992 3.12e-170 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1183 - - vvi:100255866 958.747