Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1181 ATGGCTTGGATTTGGATTTTTGCACCGTATGATGGGTACTGGAGGGAGATGAGAAAGATTTGTGTCCTCCATCCTTTCAGCTCCAAAAGGGTACAATCCTTTCGTTCCATTCGGGAAGATGAGGTTTCCCGAATTATTGAAAAAATTTCCAAGTCTGCTTCTGCGGCCAAACTCACCGACTTGAGTGAGACAGTGATGTTGCTCACCAGCAATATAATCTGTAGGACCGCTTTTGGTAAGAGGTACGAGGATAAAGGGTATGACAGAAGTAGGTTTCATGGGCTACTAAATGACGCTCAGGCAATGATGGGCAGCTTCTTTTTCACGGACCATTTTCCGTCTATGGGACCAAAACAAGAGCAAGAGGACATCGCTGTCGTTTTGCTTAGATTACAGAGGGAGAGGTTATTTTCAGTGGATCTCACTTGGGATCACATCAAGGCAGTGCTCATGGACGTATTTGTGGCGGGAACAGATCCAGGTGCAGCCACCTTGGTCTGGGCTATGGCAGAAGTGACGAAAAATCCTGGAGGGAAGAAGAAAGCCCAAGAAGAACTGAGAACTGTGTTTGGAAGGAAAGGTTTTGTAGATGAAGATGATCTTCATAAACTGCCTTATCTCAAGGCGTTGGTGAAGGAGACGCTGAGAGTGCACCCTCCAGCTCCATTGCTACTCACAAAGGAGACACTAGAAAACTGCACCATAGACGCTTATGACATACCACCCAAGACCCTGGTATTTGTGAATGCATGGGCCATTGGAAGAGATCCTGAAGCCTGGGAAAACCCAGAAGAGATCTTGCCTGAAAGATTCTTGAGTAGCTCTGTTGACTTCAAAGGACAGGATTATGAACTGATATCTTTCAGCGTTGGCCGGCGAGGTTGTCCGGGGATTCATCTTGGAGTTGTGACAGTGGAGCTTGCACTAGCTAATCTTCTTTACTCATTTGACTGA 954 0.4633 MAWIWIFAPYDGYWREMRKICVLHPFSSKRVQSFRSIREDEVSRIIEKISKSASAAKLTDLSETVMLLTSNIICRTAFGKRYEDKGYDRSRFHGLLNDAQAMMGSFFFTDHFPSMGPKQEQEDIAVVLLRLQRERLFSVDLTWDHIKAVLMDVFVAGTDPGAATLVWAMAEVTKNPGGKKKAQEELRTVFGRKGFVDEDDLHKLPYLKALVKETLRVHPPAPLLLTKETLENCTIDAYDIPPKTLVFVNAWAIGRDPEAWENPEEILPERFLSSSVDFKGQDYELISFSVGRRGCPGIHLGVVTVELALANLLYSFD* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1181 317 PRINTS E-class P450 group I signature 249 273 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1181 317 PRINTS E-class P450 group I signature 285 295 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1181 317 PRINTS E-class P450 group I signature 295 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1181 317 PRINTS E-class P450 group I signature 68 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1181 317 PRINTS E-class P450 group I signature 208 226 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1181 317 PRINTS P450 superfamily signature 156 173 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1181 317 PRINTS P450 superfamily signature 209 220 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1181 317 PRINTS P450 superfamily signature 286 295 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1181 317 Pfam Cytochrome P450 12 113 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1181 317 Pfam Cytochrome P450 120 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1181 317 SUPERFAMILY Cytochrome P450 6 317 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1181 317 Gene3D Cytochrome P450 2 317 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1181 317 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 288 297 IPR017972 GO:0005506|GO:0016705
Vvi18g1181 317 PANTHER CYTOCHROME P450 71B11-RELATED 119 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1181 Vvi-Chr18 11761857 11763067 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1181 7 317 Cytochrome P450 AT4G31500 43.840 2.62e-106 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1181 - - vvi:100245351 456.447