Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1147 ATGTGTACTAGTTTTAAGAGTCTTTTACAGATTGAGAAAAATGTGTTTGTTATTTTCTTCTCTGGAGAAAGAGTGAAGAACAAAATTCTGAAAATATGTGATGCTTTTGGAGCAAATCGTTACCCGTTTATGGATGACCTTGGTAAACAATATCAGATGATCACAGAGGTATCCAGAAGACTTTTAGAGCTGAAGACTACTGTAGATGCTGGACTTCTTCACTGGAGCAATTTGTTGCAGACAATTGGCCATCAATTTGAGCAGTGGAACCATTTGGTGAAGAAGGAGAAATCCATTTACCACACCTTAAATATGCTCAGCATTGATGTGACAAAAAAGTGTCTGGTGGCAGAAGGGTGGTGTCCTGTTTTTGCAACAAATCAGATCCAAAATGCATTGAAGCAGGCAACCTTTGACAGCAACTCCCAACTTGGGGCCATATTTCAGGTTTTGCATACAAAGGAATCACCACCTACCTATTTTCGCACTAATAAATTCACTTTGCCTTTTCAAGAAATCGTGGATGCATATGGGGTGGCCAAGTATCAGGAAGTGAATCCTGGTGTATACGTGATTATTACATTCCCTTTCCTTTTTGCTGTAATGTTTGGTGATTGGGGCCATGGAATATGCTTATTACTTGCAACCTTATATTTCATTGTCAAGGAAAAGAAATTTTCTAGTCAGAAACTAGGAGACATCATGGAGATGACTTTTGGTGGGCGTTATGTGATTATGATGATGGCACTGTTCTCAATATACACAGGATTGATATATAATGAATTCTTTTCTGTCCCTTTTGAACTATTTGGGCCCTCTGCCTATGAATGTCCCGACCCTTCCTGCAGGGGTGCTTCTATAGTGGGCTTGATTAGGGTGCGCCCCACTTATCCATTTGGTGTGGATCCTAAGTGGCATGGTTCTCGCAGTGAGTTGCCATTTCTTAACTCGTTAAAGATGAAGATGTCAATCCTACTTGGAGTAGCCCAGATGAATCTTGGAATCATATTAGGCTATTTCAATGCGACATTCTTTGGAAATAACCTAAATATTTGGTACCAATTTGTTCCCCAGATGATATTTTTAAACAGCCTTTTTGGGTACCTTTCTCTCCTCATAATTGTGAAATGGTGCATGGGTTCACAAGCTGATCTATACCATGTAATGATATATATGTTCCTGAGTCCTACTGATGACCTAGGCGAGAATCAGCTTTTTGTTGGCCAGAAAATGCTACAGCTTGTATTGCTCCTACTGGCCCTTGTTTCCATACCTTGGATGCTGTTCCCCAAGCCTTTTCTTTTGAAGAAGCAACACCAGGAAAGGCACCAAGGTCGATCCTACACACTGCTTCACAGTATTGATGACTCTCCTGAATTGGAGCGACATCATGATTCTCTTGGGCATGTGGAGTTTGAGTTTAGTGAAGTTTTTGTACACCAACTTATTCATACCATAGAGTTTGTCCTTGGAGCAGTCTCTAATACAGCTTCATACTTACGTTTATGGGCCCTCAGCCTCGCCCATTCAGAGTTGTCTAGTGTATTCTATGAGAAGGTTCTGCTTCTTGCCTGGGGGTTCAACAATGTTGTTATCCTTACCATTGGCATAATTGTGTTCATTTTTGCAACTGTGGGGGTGCTGCTAGTAATGGAAACCTTAAGTGCATTCCTGCATGCCCTAAGGCTTCATTGGGTGGAGTTCCAGAACAAGTTCTATGAGGGAGACGGTTACAAGTTCTATCCATTTTCATTTGCATTACTCACTGACGAGGATGCATGA 1782 0.4113 MCTSFKSLLQIEKNVFVIFFSGERVKNKILKICDAFGANRYPFMDDLGKQYQMITEVSRRLLELKTTVDAGLLHWSNLLQTIGHQFEQWNHLVKKEKSIYHTLNMLSIDVTKKCLVAEGWCPVFATNQIQNALKQATFDSNSQLGAIFQVLHTKESPPTYFRTNKFTLPFQEIVDAYGVAKYQEVNPGVYVIITFPFLFAVMFGDWGHGICLLLATLYFIVKEKKFSSQKLGDIMEMTFGGRYVIMMMALFSIYTGLIYNEFFSVPFELFGPSAYECPDPSCRGASIVGLIRVRPTYPFGVDPKWHGSRSELPFLNSLKMKMSILLGVAQMNLGIILGYFNATFFGNNLNIWYQFVPQMIFLNSLFGYLSLLIIVKWCMGSQADLYHVMIYMFLSPTDDLGENQLFVGQKMLQLVLLLLALVSIPWMLFPKPFLLKKQHQERHQGRSYTLLHSIDDSPELERHHDSLGHVEFEFSEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYEKVLLLAWGFNNVVILTIGIIVFIFATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFYPFSFALLTDEDA* 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1147 593 Pfam V-type ATPase 116kDa subunit family 10 585 IPR002490 GO:0033179|GO:0046961|GO:1902600
Vvi18g1147 593 PANTHER VACUOLAR PROTON ATPASES 10 591 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1147 Vvi-Chr18 11429270 11471576 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1147 10 592 Primary Pumps ATPases(2) AT2G21410 76.844 0.0 953
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1147 K02154 - vvi:100255659 1165.98