Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1119 ATGGCTTTCTTCAAAGTTCTCTCTAGCTTTTTCATGCTGACGGCTTTCCATTCTTCCACATTCTCCCTTGCCCACCCTGGTGTTGATTTTGGCTGGGATGGTAGCTTCCATCCCGGAGGAGGGTTTTCTGGTCTCTTTCCAGGCTTCTATCAGTGCTCATGCCCTCAAGCTAACGACATTGTCCTGTCAGTCTTGGAGAAAGCCATTGCAAAAGAGCCCAGGATGGCTGCCTCTCTCCTTAGGCTTCACTTCCATGACTGTTTTGTGCAGGGCTGTGATGCATCCATCTTGTTGGACGATAGTGCAAGCATAGTCAGCGAAAAGGGGTCAGGGCCGAACAAGAACTCAATTAGAGGATTTGAAGTGATCGATGAGATCAAGGCCAAGTTGGAAGAAGCATGCCCCCAGACTGTTTCTTGTGCAGACATTCTAGCCCTTGCCGCACGTGGCTCCACTGTACTAAGCGGTGGACCATTTTGGGAGCTTCCACTGGGGAGGAGGGACTCAAAAACAGCAAGTCTTACTGGCTCAAACAACAACATTCCTGCCCCAAACTCCACACTTCAAAACCTCATAACACTCTTCAAACGCCAAGGCCTAGATGAAGTTGACCTTGTTGCCCTCTCTGGGCACACGATTGGAATGGCAAGATGCGTGACCTTCAAGCAGAGGTTGTATAATCAAAATGGAGACAACCAGCCAGATGAGACCCTAGAGAAAGCCTACTACAATGGCTTGAAATCAGTGTGTCCAAAATCAGGGGGTGACAACAACATATCTCCCTTGGACTTTGCCTCACCTGCCAAATTTGATAACACCTACTTCAAGCTCATTCTCTGGGGAAGAGGCCTGCTCACTTCAGACGAAGTGCTTCTCACTGGGAATGTGGACAAGACTGAGGAGCTGGTTAGGAGATTTGCCGAGGATGAAGCCCTCTTTCTCAACCAGTTTGCCACTTCAATGGTGAAGATGGGGAACATCTCTCCGCTCACTGCTCTAAATGGTGAAATTAGGACCAACTGCCACCGCATTAACTAA 1038 0.4884 MAFFKVLSSFFMLTAFHSSTFSLAHPGVDFGWDGSFHPGGGFSGLFPGFYQCSCPQANDIVLSVLEKAIAKEPRMAASLLRLHFHDCFVQGCDASILLDDSASIVSEKGSGPNKNSIRGFEVIDEIKAKLEEACPQTVSCADILALAARGSTVLSGGPFWELPLGRRDSKTASLTGSNNNIPAPNSTLQNLITLFKRQGLDEVDLVALSGHTIGMARCVTFKQRLYNQNGDNQPDETLEKAYYNGLKSVCPKSGGDNNISPLDFASPAKFDNTYFKLILWGRGLLTSDEVLLTGNVDKTEELVRRFAEDEALFLNQFATSMVKMGNISPLTALNGEIRTNCHRIN* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1119 345 Gene3D Peroxidase, domain 2 182 325 - -
Vvi18g1119 345 SUPERFAMILY Heme-dependent peroxidases 45 345 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vvi18g1119 345 ProSitePatterns Peroxidases active site signature. 76 87 IPR019794 GO:0004601
Vvi18g1119 345 Gene3D - 49 345 - -
Vvi18g1119 345 PRINTS Plant peroxidase signature 277 294 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi18g1119 345 PRINTS Plant peroxidase signature 203 215 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi18g1119 345 PRINTS Plant peroxidase signature 156 171 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi18g1119 345 PRINTS Plant peroxidase signature 137 147 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi18g1119 345 PRINTS Plant peroxidase signature 319 332 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi18g1119 345 PRINTS Plant peroxidase signature 261 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi18g1119 345 PRINTS Plant peroxidase signature 54 73 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi18g1119 345 PRINTS Plant peroxidase signature 78 98 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi18g1119 345 PRINTS Plant peroxidase signature 118 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi18g1119 345 ProSiteProfiles Plant heme peroxidase family profile. 44 345 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi18g1119 345 CDD secretory_peroxidase 44 344 IPR033905 GO:0004601|GO:0042744
Vvi18g1119 345 PANTHER PEROXIDASE 72-RELATED 45 343 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi18g1119 345 Pfam Peroxidase 63 309 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi18g1119 345 FunFam Peroxidase 48 190 - -
Vvi18g1119 345 PRINTS Haem peroxidase superfamily signature 263 278 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi18g1119 345 PRINTS Haem peroxidase superfamily signature 76 90 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi18g1119 345 PRINTS Haem peroxidase superfamily signature 203 218 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi18g1119 345 PRINTS Haem peroxidase superfamily signature 156 168 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi18g1119 345 PRINTS Haem peroxidase superfamily signature 138 155 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi18g1119 345 FunFam Peroxidase 182 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1119 Vvi-Chr18 11184220 11185662 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1119 1 345 Peroxidase AT1G44970 75.000 0.0 518
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1119 K00430 - vvi:100242093 678.707