Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1095 ATGGAGTTGGATGAGATCAAAAGGAGCATGCTGAATCTTTTGCCTAATGCCACTCTCCAGCTTTGCTGTTACACAGTGGTGCTCATCGTCTCGTTGATGTGGTTGATGCGTGGGATAGCCAGGGTCTTGCGTGACTCTCATTGGGAATCAACTGCCAAGATTCCTCCCGGGAGTAGAGGACTACCCTTGATCGGAGAAACTCTGCACTTCATGGCTGCCACCAGCTCTTCCAAAGGCTTCTATGACTTTGTTCATATTCGTCAACTCCGGTATGGAAACTGTTTTAGGACCAGCATATTTGGGCAGACTCATGTTTTTGTTTCAAGCACGGAGTCGGCAAAAGTGGTACTGAACAATGAAGTGGGGAAGTTCACAAAGAGATACATAAAATCAATCGCAGAGCTAGTGGGAAATGAGAGCCTACTGTGTGCATCTCATCAGCACCACAAATTGATCCGTGGTCGTCTGATCAATCTCTTCTCTACTGCTTCCATTTCCTCATTTATCAAACAGTTTGATCAACTGATTGTCACTACTCTCAGTGGCTGGGAACACAAACCCACTGTGGTTGTGCTCCATGAAGCTCTTGAGCTAATCTGTAAAGCCATGTGCAAGATGTTGATGAGTTTAGAGAGCGGAGATGAAGTAGAGATGCTGCAAAAGGATGTTGCCCATGTTTGTGAAGCAATGATTGCCTTCCCTTTGAGGCTACCCTGCACTCGATTCTATAAAGGCCTTGAGGCAAGAAAAAGAGTAATGAAAATGCTGGAGAAGAAAATCGAGGAAAGGAGAAGAGGAGAAGCCTATCATGAAGACTTTCTACAACATCTCCTGAAAGACAATGGTAGTGCCTGTTGTGATGAAGTCCCACCCTTAACGGATGCAGAGATCCAAGACAACATTTTAACCATGATAATTGCAGGCCAGGATACAACAGCAAGTGCAATCACTTGGATGGTGAAGTACCTGGACGAGAACCAACAGGTCCTCCACACACTCAGAGCAGAGCAAGGCCGAATTGCAGAAAAAACTTCACACACCTCGTCTCTTACACTGGATGATCTTAATGAGATGCCATATGCTTCTAAGGTGGTGAAAGAATCGTTAAGGATGGCATCTATAGTAGCATGGCTCCCAAGAGTAGCCCTCCAGGACTGTGAGGTTCAAGGGTTTAAGATCAAGAAGGGGTGGAACATCAATATCGATGCTAGATCTATACATCTTGATCCTACGTTGTACAACAATCCCACCATGTTCATTCCTTCCAGGTTTGATGGTGAACCAAAGCCAAATAGCTTTTTAGCTTTCGGAACTGGGGGGAGGACATGCCTGGGAATGAACATGGCTAAAGCCATGATGCTAGTCTTTCTGCACCGCCTGATTACCACTTACAACTGGACGGTAGTGAACCCGGATTCAAGCATCGAGAAGTGGGCTCTATTCTCGAGACTAAAAAGCGGCTGCCCCATTCATGTTAGCCCGATTGCAAAGGATGCAGCGGACGCGTAA 1509 0.4599 MELDEIKRSMLNLLPNATLQLCCYTVVLIVSLMWLMRGIARVLRDSHWESTAKIPPGSRGLPLIGETLHFMAATSSSKGFYDFVHIRQLRYGNCFRTSIFGQTHVFVSSTESAKVVLNNEVGKFTKRYIKSIAELVGNESLLCASHQHHKLIRGRLINLFSTASISSFIKQFDQLIVTTLSGWEHKPTVVVLHEALELICKAMCKMLMSLESGDEVEMLQKDVAHVCEAMIAFPLRLPCTRFYKGLEARKRVMKMLEKKIEERRRGEAYHEDFLQHLLKDNGSACCDEVPPLTDAEIQDNILTMIIAGQDTTASAITWMVKYLDENQQVLHTLRAEQGRIAEKTSHTSSLTLDDLNEMPYASKVVKESLRMASIVAWLPRVALQDCEVQGFKIKKGWNINIDARSIHLDPTLYNNPTMFIPSRFDGEPKPNSFLAFGTGGRTCLGMNMAKAMMLVFLHRLITTYNWTVVNPDSSIEKWALFSRLKSGCPIHVSPIAKDAADA* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1095 502 CDD CYP90-like 87 494 - -
Vvi18g1095 502 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1095 502 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1095 502 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1095 502 PRINTS E-class P450 group I signature 88 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1095 502 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1095 502 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1095 502 SUPERFAMILY Cytochrome P450 51 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1095 502 PRINTS P450 superfamily signature 443 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1095 502 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1095 502 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1095 502 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1095 502 PANTHER CYTOCHROME P450 26 54 475 - -
Vvi18g1095 502 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
Vvi18g1095 502 Gene3D Cytochrome P450 44 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1095 502 FunFam cytochrome P450 90A1-like isoform X1 45 495 - -
Vvi18g1095 502 Pfam Cytochrome P450 55 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1095 Vvi-Chr18 10968173 10971522 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1095 23 467 Cytochrome P450 AT1G19630 61.915 0.0 573
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1095 - - vvi:100267651 1010.36