Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1061 ATGGGATCGAGTTCAAATAATTGGACTACCAAGCAAAACAAACTGTTCGAGAATGCTTTGGTGATGTATGACAAGGACACCCCGGACCGCTGGCAGAACATGGCCAGGGCTGTGGGTGGGAAGACTGTGGAGGAGGTGAAGAGGCACTATGAGATGCTTGTGGAGGATGTCAAGCATATTGAGTCTGGCCAAGTCCCATTGCCTAACTACAGAAAAGCTGGAGCCTCCAACAAAGGATACAGCTTCAACGATGAAGAACAGAGGTTGAAGTATCTGAAGCTCTAA 285 0.4807 MGSSSNNWTTKQNKLFENALVMYDKDTPDRWQNMARAVGGKTVEEVKRHYEMLVEDVKHIESGQVPLPNYRKAGASNKGYSFNDEEQRLKYLKL* 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1061 94 ProSiteProfiles SANT domain profile. 3 58 IPR017884 -
Vvi18g1061 94 FunFam Transcription factor SRM1 1 67 - -
Vvi18g1061 94 CDD SANT 7 54 IPR001005 -
Vvi18g1061 94 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 3 86 IPR044636 GO:0003700
Vvi18g1061 94 SMART sant 4 56 IPR001005 -
Vvi18g1061 94 SUPERFAMILY Homeodomain-like 7 61 IPR009057 -
Vvi18g1061 94 Gene3D - 2 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1061 Vvi-Chr18 10722524 10723000 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Vvi18g1061 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1061 - - vvi:100255743 186.422