Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1048 ATGGCAAAGAGATCAGATTTTGCGCAGAAGCTGTTGGATGATCTGCGCTTGCGGAAAGAGCGGATGGCTGCTGGTCAGACTTCCGGCCGTTCTTCGACAATGACGGGAGAAACATATAGTTACTACAGGCAAACTCAAAAAGGATTTACAGAAATAAAAAAGCATGATATTTTTGGTTCGAAAGCAGGACACACACCCAAAAGGTCAAAGGGAGAAAACAGACCACTGACCATTGGAGATTCCTCCAAACAGATTGTTTCCTATGGGAGAGGCCGAGGCTCAGAACAGATGGGAGATCTTTCTTTGGCCCTTGCTCTTGCCTTGGAGAATGGAGGAAAACTCGGAAAAATGAACTCCTCAGGCAGTAATTCAGTGCTTGGTTTCCTGCACCAAATTGGTAGGAGATCAGGGAACTTTGGGAAGATGGAAAAAGGAAGAAGTGTCGATATGCACATGTCTTCAACTAGTCAGTTTCCTACTCTCTCTCCTCTTCAGGTCAAAGAGATATCAAAGGGTGCACAGAAATTGAATCAAATCCTCAGAGCCTGCTCTAATGGTATTAACTTTGACAGCTATTCTATAGAAATTGGGAAGGAACTTCTGAAAGGCGCCATGGATTTGGAAGAGTCCCTGAGAATGCTTGTAAACCTGCAGGAAGCTTCAGAGCACATGGTCACCCCACAGAGGAAAAACCGGATCAAACTGCTGGAGGGTGATGAAGATGAAGATGATGACATTGTCAAAGTTGATGAACAGAAGCAGCTGGACCGACCGATATTCTCCTTTGATAAGCCCTCAAGGGGCACACACCAAGTTTCAAGGACTGGTCTCAAGCAGAGGCTGACTCTGACATACTCATCAGAAGCTTCCAACTTGAACCATGAAAGCCGAGCTTTAGTTGCCTCAAATTCTCAATCAGGATCAGCTAGATATGTCAATGATTTCAAAGCTCTTGGTGTTCTATCCGAACACAAGAAAACTTCAAGTTCAGCAAGATCAAAACCAGACAAGGGTATTCCAAATATAATTGCCAAACTAATGGGACTGGAAGAAATTCCAGGAGCTATGGATTCAAAGCATGGAACTCAGACAGATTTGAGCTCTAGGCAAAAAATGGATGGAAGGGATTCAAAGAAAACTGCACTTGAAAGCACCAAGAATGATGAACCAAAGTCCAAACATGCTGAGAATATGGCACTCCAAACTGCAAGGCAGAGGTTGAAACAGTCCACCAAGACGCTGGTGACCCAGAACACTGCATTTGGGCAGCAAGCAGAAAAAAACCCAGGGACTCGCAATGCCAACCTTGAGATGGTGGTTCATAATGGAAAACCACCTTGGAAGGACTCAGAAAATGTTGAAGGTAAAAATGCGGGGACAGCCACAAAGAAGGCCACTGCAAAAATAAGCAAGCAGCAACAAAGCAACATTCAATTGACAGAAATTACTGGAAGTCAAAATAGCATACTGGAAAATGCAAGACGGCGGGATGATACAATCCTCAGGGAACATAAGGTCATAGAAAGGCGTGAAACAAAAGAACCGTTCTTAAAGCATGTGCAGCTCCAGGTGGCACCACCTACACATATAATTCCAGAAGCTGCAAAGGGACTGCAACATAAGACAGGGCAAAATGGAAGTACACCTCAAGCAGAACAGAGATATGCAAACAGGCTTTTCCCAAGCAATCAACAAAATATGGTAAATAATCTTGGATTGCAGCAACTGAACATGATCCAAAAATCTGAGCATCAACAAGAAAAACATCAAGCAGCAGAGAAGGAGCAGAATGTCAGGCAGAAATCACAGGGGGGAGTACAGAAAGGAATTGAGGTAGTCTCGAAGAGTTCATCAAAAAGCACGCATGAGACTGTGAATCTGCAAAAGAAGCATCCACATTTGAACCAATCCACACATGGTAAGAAAAGTTCAACAGATGCAACTGATGCGATGCCACACAAAGGATTTCCAAATACCAAACACCATGAAAATATGGTCAGATATGGAAGTCCTACCAACTTAAAGGTCAACATAAAAGATTCAATGCACAAGAACTTCGATCAAAGTGCCTCACGAACAGATGTAGAACCTCAATCAAAAAAGGCAAAAGCTAACATTCTGCCTATTATGAAAGAGAAGGCTGTTCACGTTACACCCGCTCAGAAGAAGATAGACAATACTAAAGTGCATAAAAGGGAGACCCCTCAAAAGATTGATGAAGTAATGACCAGAAGAAATGGAACTAACTTGGTAAGGCCACTGAAGCACCCAATATCAATTTTGCAAGAAATGAAACAGAGAAGGCAGGACAAAATTGGAGGCACCAAAAGAGCTGAACAAGGGAGTGCTGTCAGACACAAAGAAGCAGAGGTGCACATTATTAATTCCAAGAAATCAGAAGCAAACACCCAACCATTTGCTGTGGCACAGAAATTGCATAAAGATGCTGAACTGGCTTCCAGTTTGTACGGTTCTGTGGGAAATGAATGCCAAAGCCTAAAAGAACCACATACTCTAGCTCCAAATGACACTTGCCAAGACATAATCTCGAAGGGTTCCATTGATCAGCAAGGCCAGGCACCTCTTTCTATCAAAGATCAAGAACCAGGGTTTCTCAAAATTGTATCAAATCCGCTTATTGGAAATCAAGAAAGAAGTGTGGATCTCTCTCATACTGTTCAACTGGAGCCCCGGAAAATTTCCAAATCAAGGACACAGCAGCAACCACTGACAGAAAATGAAAACCACCTCAAGCAGATACTAATAAAAAGCCAACTATTTCTTAACACAGCAGAGGCACTCTTCAAACTCAATGTTCCTATTGGCATTCTTCATGCTAGTGGCCATAACTGTCATGATGAGGAAAGCAGGCTCATATTAGATTGCGGCTATGAACTAATGAGAAGAAAAGGGAAAAGACAAGAACTCAGTGTTCATCCTTTCGTGAAGATATCAATCAGTTCCACAAAGATAGCTTCTTTGGATGACTTGGTAAAGCAGTTGCATATAGACTTTGAGAAGTTGAAATCATGTGGCAGGGATGGGAGTGATGAGTGTGATGCTGCAGACTACCTACCAAAAATGCTCGAGCTAGACGTCCAAACCATGGATCCAGATGTGAACTGCTTGTGGGACCTTGGTTGGAATGATAAGATGTTTGCATTTATTGAAAAAGATGATGTTATAAGGGATGTGGAGAGGCATGTATTCAGTGGACTCATAGGTGAGATTACCAGAGATTTTTTGCATCTAAGCATACCAAATTGA 3267 0.4261 MAKRSDFAQKLLDDLRLRKERMAAGQTSGRSSTMTGETYSYYRQTQKGFTEIKKHDIFGSKAGHTPKRSKGENRPLTIGDSSKQIVSYGRGRGSEQMGDLSLALALALENGGKLGKMNSSGSNSVLGFLHQIGRRSGNFGKMEKGRSVDMHMSSTSQFPTLSPLQVKEISKGAQKLNQILRACSNGINFDSYSIEIGKELLKGAMDLEESLRMLVNLQEASEHMVTPQRKNRIKLLEGDEDEDDDIVKVDEQKQLDRPIFSFDKPSRGTHQVSRTGLKQRLTLTYSSEASNLNHESRALVASNSQSGSARYVNDFKALGVLSEHKKTSSSARSKPDKGIPNIIAKLMGLEEIPGAMDSKHGTQTDLSSRQKMDGRDSKKTALESTKNDEPKSKHAENMALQTARQRLKQSTKTLVTQNTAFGQQAEKNPGTRNANLEMVVHNGKPPWKDSENVEGKNAGTATKKATAKISKQQQSNIQLTEITGSQNSILENARRRDDTILREHKVIERRETKEPFLKHVQLQVAPPTHIIPEAAKGLQHKTGQNGSTPQAEQRYANRLFPSNQQNMVNNLGLQQLNMIQKSEHQQEKHQAAEKEQNVRQKSQGGVQKGIEVVSKSSSKSTHETVNLQKKHPHLNQSTHGKKSSTDATDAMPHKGFPNTKHHENMVRYGSPTNLKVNIKDSMHKNFDQSASRTDVEPQSKKAKANILPIMKEKAVHVTPAQKKIDNTKVHKRETPQKIDEVMTRRNGTNLVRPLKHPISILQEMKQRRQDKIGGTKRAEQGSAVRHKEAEVHIINSKKSEANTQPFAVAQKLHKDAELASSLYGSVGNECQSLKEPHTLAPNDTCQDIISKGSIDQQGQAPLSIKDQEPGFLKIVSNPLIGNQERSVDLSHTVQLEPRKISKSRTQQQPLTENENHLKQILIKSQLFLNTAEALFKLNVPIGILHASGHNCHDEESRLILDCGYELMRRKGKRQELSVHPFVKISISSTKIASLDDLVKQLHIDFEKLKSCGRDGSDECDAADYLPKMLELDVQTMDPDVNCLWDLGWNDKMFAFIEKDDVIRDVERHVFSGLIGEITRDFLHLSIPN* 1089
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1048 1088 MobiDBLite consensus disorder prediction 19 39 - -
Vvi18g1048 1088 MobiDBLite consensus disorder prediction 57 83 - -
Vvi18g1048 1088 MobiDBLite consensus disorder prediction 630 645 - -
Vvi18g1048 1088 MobiDBLite consensus disorder prediction 25 39 - -
Vvi18g1048 1088 MobiDBLite consensus disorder prediction 353 395 - -
Vvi18g1048 1088 PANTHER OS01G0228800 PROTEIN-RELATED 8 1082 - -
Vvi18g1048 1088 Coils Coil 581 601 - -
Vvi18g1048 1088 MobiDBLite consensus disorder prediction 364 395 - -
Vvi18g1048 1088 MobiDBLite consensus disorder prediction 581 665 - -
Vvi18g1048 1088 MobiDBLite consensus disorder prediction 582 596 - -
Vvi18g1048 1088 MobiDBLite consensus disorder prediction 442 464 - -
Vvi18g1048 1088 MobiDBLite consensus disorder prediction 597 623 - -
Vvi18g1048 1088 MobiDBLite consensus disorder prediction 57 74 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1048 1 353 TRM (TON1 Recruiting Motif) Superfamily AT5G42710 37.989 1.99e-49 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1048 - - vvi:100267647 2099.32