Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1028 ATGCATCTTCTACTGCTTGCCCTATTCGTCAGTATTGCGATACTGGTATTCAAATCCGTACACTCAATCATCTGGGTTCCATGGAGGATCCAGCAACACTTCAAGACTCAAGGCATAGGAGGCCCAGGGTACCGACCCATTTCAGGAAACGTGGGCGAGTTGCAGCGTATGTACGCGGAAGCTCAGTCGAAATCAATGGGTGGATTGCAGCATGACATACTTCATCGAGTGCTTCCTTACTACTCCAGGTGGTCAGGCGCTTACGGGAAGACGTTTATTTGGTGGGTCGGGACAAAGCCGCGGCTGGCTCTAGCCGATCCGGAGCCCATTAAGGAGGTTTTCCTAAACACAGGTGTGTCCTATGATAAGGTTGGGTTTAGTCCCCTGACTAGGCCACTGTTTGGAGATGGGCTTGGTGGGTTGAATGGTGAGAAGTGGGCTCTTCATAGAAGAATCACGAACCAGGCTTTCAACATGGAGAGAGTTAAGGGGTGGGTGCCGGAAATTGTGGCAAGTACTAGAAAGATGTTGGAAGAGTGGGAGGAAGTAAGAAGAGGGAGGGATGAATTGGAAAGGGAAGTGCATAGAGAACTGCAAAATCTTTCTGCAGACATTATATCTAGAACTGCTTTTGGGAGCAGTTTCCAAGAGGGAAAACACATTTTTGAACTACAAGAACAGCAAATGCACCTTATCGCCAAGGCTCTAAGAAGTATCCACATTCCTGGCTTCAGATACTTGCCCACTAAAACGAATAGAGAAAGTTGGAGAATAGAGAAGGAAATTGAAGAATCAATACAAAGGCTGATAGACAATAACAACAAAACTAAAGAGAATTCTAAAAATCTAGTCAGTCTATTATTGTCAACCTACAAGAATCAGCATGGTGAAGAAGAGAAATTGACCGTGCAAGAAGTTATAGACGAATGCAAGACCTTCTACTTTGCAGGAAAGGAAACAACTGGTAATCTTTTGACTTGGGCACTTGTCCTTTTAGCAATGCATCAAGAATGGCAAACCAAGGCACGAGAAGAAGTGGTCCAAGTCTATGGCCACACCATGTCTCCCTCTGCAGATAATTTAAGGGAGCTCAAGATTGTGGGCATGATAATCAATGAAACACTTCGACTCTATCCCCCTACCCAGACCATGTCAAGGGTATCAACAAAAAATGTAATGTTAGGAAGGGTAGATGTTCCCGCAGGCACAGAAATCTATTCGGCTATGATTGGTGTTCATCATGACACTCAAATATGGGGTGAAGATGCTAATGAATTCAACCCCTTAAGATTTAAGGAGCCTCGGAATCAATTAGGCTCATTTTTCCCATTTGGGTTAGGCCCCAGGATATGCATAGGTCAAAATTTCGCAATGATGGAGGCGAAAATTGTCCTAGCCATGATCATTCAACAATATTCCTTTGTGTTATCACCAACATATGTTCATGCCCCAACGCAGATCTTGACCTTGCAGCCCCAGTGGTCCGGCGCTTACGGGAAGACGTTTATTTGGTGGTTCGGGACAAAGCCCCGGCTGGCTCTAGCCGATCCGGAGTCGATTAAGGAGGTTCTCCTAAACACAGGTGTGTCCTATGATAGGGTTGGGTTTAGTCCCCTGTCTAGGCCGCTGTTTGGAGATGGACTTGCCGCGTTGAAGGGTGAGAAGTGGGCTCTTCATAGAAGAATCGCGAACCGGGCCTTCAACATGGAGAGAGTTAAGGGGTGGGTGCCGGAAATTGTGGCAAGTACCAGAAAGATGTTGGAAGAGTGGGAGGAAGCTAGAGGAGGGAGGGATGAATTGGAAAGGGAAGTGCATAGAGAACTGCAAAATCTTTCTGCAGACGTTATATCTAGAACGGCTTTTGGGAGCAGTTTTCAAGAGGGAAAACACATTTTTGAACTACAAGAACAGCAAATGCACCTTATCGCCAAGGCTCTAAGAAGTATCCACATTCCTGGCTTCAGATACTTGCCCACTAAAACGAATAGAGAAAGTTGGAGAATAGAGAAGGAAATTGAAGAATCAATACAAAGGCTGATAGACAATAACAACAAAACAAAAGAGAATTCTAAAAATCTAGTCAGTCTATTATTGTCAACCTACAAGAATCAGCATGGTGAAGAAGAGAAATTGACCGTGCAAGAAGTTATAGACGAATGCAAGACCTTCTACTTTGCAGGAAAGGAAACAACTGGAAATCTTTTGACTTGGGCACTTGTCCTTTTAGCAATGCATCAAGAATGGCAAACCAAGGCACGAGAAGAAGTGGTCCAAGTCTATGGCCACACCATGTCTCCCTTTGCAGATAATTTAAGCGAGCTCAAGATTGTGGGCATGATAATCAATGAAACACTTCGACTCTATCCCCCTGCCCAACCCATGTCAAGGGTACCAACAAAAAGTGTAAAGTTAGGAAGGGTAGATATTCCTGCAGGCACACAAATCTTTGCGACTATGACTGCTGTTCATCATGACACTCAAATATGGGGTGAAGATGCTAATGAATTCAACCCTTTTAGATTTAAGGAGCCTAGGAAGCAATTAGCCTCATTTTTCCCTTTTGGGTTGGGCCCCAGGATATGTGTAGGTCAAAATTTGGCGATGGTTGAGGCAAAAATTATCCTAGCCATGATCATCCAACAATATTCCTTTGTGTTATCTCCAACATATGTTCATGCCCCAATGCAGAGCTTGTCCTTGCATCCCCAGTATGGTGCCCACATCCACTTTACAAGGATTTGA 2742 0.4453 MHLLLLALFVSIAILVFKSVHSIIWVPWRIQQHFKTQGIGGPGYRPISGNVGELQRMYAEAQSKSMGGLQHDILHRVLPYYSRWSGAYGKTFIWWVGTKPRLALADPEPIKEVFLNTGVSYDKVGFSPLTRPLFGDGLGGLNGEKWALHRRITNQAFNMERVKGWVPEIVASTRKMLEEWEEVRRGRDELEREVHRELQNLSADIISRTAFGSSFQEGKHIFELQEQQMHLIAKALRSIHIPGFRYLPTKTNRESWRIEKEIEESIQRLIDNNNKTKENSKNLVSLLLSTYKNQHGEEEKLTVQEVIDECKTFYFAGKETTGNLLTWALVLLAMHQEWQTKAREEVVQVYGHTMSPSADNLRELKIVGMIINETLRLYPPTQTMSRVSTKNVMLGRVDVPAGTEIYSAMIGVHHDTQIWGEDANEFNPLRFKEPRNQLGSFFPFGLGPRICIGQNFAMMEAKIVLAMIIQQYSFVLSPTYVHAPTQILTLQPQWSGAYGKTFIWWFGTKPRLALADPESIKEVLLNTGVSYDRVGFSPLSRPLFGDGLAALKGEKWALHRRIANRAFNMERVKGWVPEIVASTRKMLEEWEEARGGRDELEREVHRELQNLSADVISRTAFGSSFQEGKHIFELQEQQMHLIAKALRSIHIPGFRYLPTKTNRESWRIEKEIEESIQRLIDNNNKTKENSKNLVSLLLSTYKNQHGEEEKLTVQEVIDECKTFYFAGKETTGNLLTWALVLLAMHQEWQTKAREEVVQVYGHTMSPFADNLSELKIVGMIINETLRLYPPAQPMSRVPTKSVKLGRVDIPAGTQIFATMTAVHHDTQIWGEDANEFNPFRFKEPRKQLASFFPFGLGPRICVGQNLAMVEAKIILAMIIQQYSFVLSPTYVHAPMQSLSLHPQYGAHIHFTRI* 914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1028 913 SUPERFAMILY Cytochrome P450 71 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1028 913 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506|GO:0016705
Vvi18g1028 913 Pfam Cytochrome P450 496 895 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1028 913 Pfam Cytochrome P450 81 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1028 913 Coils Coil 259 279 - -
Vvi18g1028 913 PRINTS E-class P450 group I signature 861 884 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1028 913 PRINTS E-class P450 group I signature 851 861 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1028 913 PRINTS E-class P450 group I signature 201 219 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1028 913 PRINTS E-class P450 group I signature 305 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1028 913 PRINTS E-class P450 group I signature 325 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1028 913 PRINTS E-class P450 group I signature 85 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1028 913 Coils Coil 669 689 - -
Vvi18g1028 913 PANTHER CYTOCHROME P450 FAMILY MEMBER 20 489 - -
Vvi18g1028 913 PRINTS P450 superfamily signature 316 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1028 913 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1028 913 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1028 913 PRINTS P450 superfamily signature 451 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1028 913 FunFam Cytochrome P450 734A1 24 495 - -
Vvi18g1028 913 Gene3D Cytochrome P450 64 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1028 913 Gene3D Cytochrome P450 495 912 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1028 913 FunFam Cytochrome P450 734A1 496 913 - -
Vvi18g1028 913 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 854 863 IPR017972 GO:0005506|GO:0016705
Vvi18g1028 913 SUPERFAMILY Cytochrome P450 490 912 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1028 Vvi-Chr18 10370740 10384207 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1028 493 913 Cytochrome P450 AT1G75130 57.720 7.18e-176 517
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1028 - - vvi:100250571 1001.89