Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi18g1027 | ATGCATCTTCTACTGCTTGCCCTATTCTTCAGTGCTGTGATACTGGTATTCAAATTCGTACACTCAATCATCTGGGTTCCATGGAGGATCCAACAACACTTCAGGACTCAGGGCATCGGCGGCCCAGGGTACCGACCCATTTCAGGAAACGTGGGCGAGTTCCAGCGTATGTACTCGGAGGCTCAGTCGAAATCAATGAGTGGATTGCAGCATGACATACTTCACCGGGTGCTTCCGCACTACTCCAGGTGGTCAGGCGCTTACGGGAAGACGTTTATTTGGTGGTTAGGGACAAAGCCCAGGCTGGCTCTAGCAGATCCGGAGTCGATTAAGGAGGTTTTCCTCAAAGCAGGTGTGTCCTATGATAAGGCTAGGTTTAACCCCTTGTCTAAGCTGCTGTTTGCAGATGGACTTGTTGCGTTGAACGGTGAGAAGTGGGCTCTTCATAGAAGAATCACGAATCAGGCTTTCAATACGGAGACAGTTAAGGGGTGGGTGCCGGAAATTGTGGCAAGTACTAGTAAGATGTTGGAAGAGTGGGAGGAAGCAAGAAGGGGGAGGGATGAATTGGAAAGGGAAGTGCATAGAGAGCTGCAAAATCTTTCTGCAGACATTATATCCAGAACGGCTTTTGGGAGCAGTTTCCAAGAGGGAAAATGCATTTTTGAACTACAAGAACAGCAAACCCACCTCGTCGTCCAGGCTTTGAGAAGTATCTACATTCCTGGCTTCAGATATTTGCCCACTAAAAAGAATAGAGAAAGGTGGAGAATAGAGAAGGAAATTGAAGAATCAATACAAAGGCTGATAGACAATAACAACAAAACGAAAGAGAATTCTAAAAATCTAGTCAGTCTACTGTTGTCTGCCTTCAAGAATCAGCACGGTGAAGAAGAGAGATTAACAGTGCAAGAAGTTATAGACGAATGCAAGACCTTCTACTTTGCAGGAAAGGAAACAACTGGTAATCTTTTGACTTGGGCACTTGTCCTTTTAGCAATGCATCAAGAATGGCAAACCAAGGCACGAGAAGAAGTGGTCCAAGTCTATGGCCACACCATGTCTTCCTCTGCAGACAATTTAAGCAAGCTCAAGACTGTGGGCATGATAATCAATGAAACACTTCGACTCTATCCCCCTGTCCAAACCATGTCAAGGGTACCGCCAAAAAATGTGAAGTTAGGAAGGTTAGATGTTCCTGCAGGCACACAGATCTCTTTGGCCATGACCGCTGTTCATCATGACACTCAAATATGGGGTGAAAATGCTAATGAATTCAACCCCTTCAGATTTAAGGAGCCTCGGAAGCAATTAGGCTCATTTTTCCCATTTGGGTTAGGCCCCAGGATATGCATAGGTCAAAATTTTGCGATGGTTGAGGTGAAAATTGTCCTAGCCATGATCATCCAACAATATTCCTTTGTCTTATCTCCAACATATGTTCATGCCCCAACGCAAATCTTTACCCTGCAGCCCCAGTACGGTGCCCACATCCTCTTTACAAGGATTTGA | 1512 | 0.4544 | MHLLLLALFFSAVILVFKFVHSIIWVPWRIQQHFRTQGIGGPGYRPISGNVGEFQRMYSEAQSKSMSGLQHDILHRVLPHYSRWSGAYGKTFIWWLGTKPRLALADPESIKEVFLKAGVSYDKARFNPLSKLLFADGLVALNGEKWALHRRITNQAFNTETVKGWVPEIVASTSKMLEEWEEARRGRDELEREVHRELQNLSADIISRTAFGSSFQEGKCIFELQEQQTHLVVQALRSIYIPGFRYLPTKKNRERWRIEKEIEESIQRLIDNNNKTKENSKNLVSLLLSAFKNQHGEEERLTVQEVIDECKTFYFAGKETTGNLLTWALVLLAMHQEWQTKAREEVVQVYGHTMSSSADNLSKLKTVGMIINETLRLYPPVQTMSRVPPKNVKLGRLDVPAGTQISLAMTAVHHDTQIWGENANEFNPFRFKEPRKQLGSFFPFGLGPRICIGQNFAMVEVKIVLAMIIQQYSFVLSPTYVHAPTQIFTLQPQYGAHILFTRI* | 504 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi18g1027 | 503 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 444 | 453 | IPR017972 | GO:0005506|GO:0016705 | |
| Vvi18g1027 | 503 | FunFam | Cytochrome P450 734A1 | 24 | 503 | - | - | |
| Vvi18g1027 | 503 | SUPERFAMILY | Cytochrome P450 | 68 | 502 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi18g1027 | 503 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 18 | 496 | - | - | |
| Vvi18g1027 | 503 | Coils | Coil | 259 | 279 | - | - | |
| Vvi18g1027 | 503 | PRINTS | P450 superfamily signature | 442 | 451 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi18g1027 | 503 | PRINTS | P450 superfamily signature | 451 | 462 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi18g1027 | 503 | PRINTS | P450 superfamily signature | 316 | 333 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi18g1027 | 503 | PRINTS | P450 superfamily signature | 369 | 380 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi18g1027 | 503 | Pfam | Cytochrome P450 | 83 | 481 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi18g1027 | 503 | Gene3D | Cytochrome P450 | 45 | 502 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi18g1027 | 503 | PRINTS | E-class P450 group I signature | 451 | 474 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi18g1027 | 503 | PRINTS | E-class P450 group I signature | 325 | 351 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi18g1027 | 503 | PRINTS | E-class P450 group I signature | 85 | 104 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi18g1027 | 503 | PRINTS | E-class P450 group I signature | 201 | 219 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi18g1027 | 503 | PRINTS | E-class P450 group I signature | 305 | 322 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi18g1027 | 503 | PRINTS | E-class P450 group I signature | 441 | 451 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vvi18g1027 | Vvi-Chr18 | 10363578 | 10366849 | Dispersed/Proximal |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Vvi18g1027 | 21 | 503 | Cytochrome P450 | AT1G75130 | 56.495 | 0.0 | 573 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vvi18g1027 | - | - | vvi:100262602 | 1005.36 |