Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1009 ATGACGTCAGAGAGGACGCCGACGAGGAGGAAGGCGTCGTGGAAGGAGAGGGAGAACAACATGAGGAGAGAGAGGAGGAGGAGAGCCATAGCGGCAAAGATATATGCGGGCCTCAGGGCTCAGGGCAACTATCGTCTTCCAAAACACTGCGATAACAACGAGGTCCTCAAGGCTCTCTGCTCCGAAGCTGGTTGGACCGTTGAAGATGACGGCACCACCTATCGCAAGGGATGCAAGCCTCCCCCCTCAACTGAGATTGCAGGAACTTCCACAAACAACACTCCCTGCTCTTCCCAGAAACCAAGCCCACCATCTTCCTCCTTTCCAAGCGCATTCGCTTCCTACCAACCCAGTCCCTCATCCTCAAACCTGTCTTTCATGGATGCCAATGCCTCTCTCAATCTCCTTCCATTTCTCTACAAGTCTATCCCTTCATCTCTGCCTCCTCTCCGAATATCAAACAGTGCTCCTGTAACACCACCTATTTCGTCCCCAACCTCCAGAGTTCCCATGCCTAAACCCAACTGGGAGTCCCTTGCCAAAGAATCCATGGCCTCTATCCATCACCATTACCCCATCTTTGCTGCTTCTGCCCCAGCAAGCCCTTCTCGCTGTCAGTATATTGCTCCTGCCACTATACCTGAATATGAGGAGTCTGACACCTCAACTGTTGAGTCAGGCCAGTGGGTGAGTTTTCAGACGTTTGCACGCCATCTTGCTCCATTGCCCCCAACCTTCAATCTTATGAAACCTGTGGCTCAGAAAATTTCACCAGATGAAGCAACCAAAGAGAAGGGGATAACTCCCGAGTTGGAAATTGGAAGTGCACAGGTGAAGCCCTGGGAAGGGGAGAGGATTCATGAGATAGGTTTGGATGATCTGGAGCTTACACTAGGAAGTGGAAAGAGTAGGAGTAAAGGCTAA 924 0.513 MTSERTPTRRKASWKERENNMRRERRRRAIAAKIYAGLRAQGNYRLPKHCDNNEVLKALCSEAGWTVEDDGTTYRKGCKPPPSTEIAGTSTNNTPCSSQKPSPPSSSFPSAFASYQPSPSSSNLSFMDANASLNLLPFLYKSIPSSLPPLRISNSAPVTPPISSPTSRVPMPKPNWESLAKESMASIHHHYPIFAASAPASPSRCQYIAPATIPEYEESDTSTVESGQWVSFQTFARHLAPLPPTFNLMKPVAQKISPDEATKEKGITPELEIGSAQVKPWEGERIHEIGLDDLELTLGSGKSRSKG* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1009 307 Pfam BES1/BZR1 plant transcription factor, N-terminal 9 125 IPR008540 -
Vvi18g1009 307 MobiDBLite consensus disorder prediction 1 26 - -
Vvi18g1009 307 MobiDBLite consensus disorder prediction 1 25 - -
Vvi18g1009 307 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 5 304 IPR033264 GO:0003700|GO:0006351|GO:0009742
Vvi18g1009 307 MobiDBLite consensus disorder prediction 70 114 - -
Vvi18g1009 307 MobiDBLite consensus disorder prediction 84 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1009 Vvi-Chr18 10237475 10238722 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1009 9 304 BZR Transcription Factor Family AT1G75080 61.905 1.66e-111 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Vvi18g1009 BES1_N 1.2e-56 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1009 K14503 - vvi:100262472 524.628