Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0972 ATGGCGTCCCCTTCTCTAACTTTCCCTTCCCTGCAACTACAATTCCCAACACACACAAAATCATCTAAGCCATCCAATCATAAGCTCATTGTTCGCCCGATATTTGCCTCTGTTTCTGAGAAACCATCGGTACCGGTTTCTCAGTCTCAGGTGACGCCCCCCGGTCCAATCAGGAAAATTCCCGGAGATTATGGTCTCCCTTTCATCGGTCCCATAAAAGATCGTCTTGATTATTTCTATAATCAAGGCAGAGAAGAGTTCTTCAGGTCCAGAGCCCAGAAACACCAGTCAACCGTGTTCCGGTCCAACATGCCACCCGGCCCTTTCATCTCCTCCAACTCCAAAGTCATCGTTTTACTGGATGGGAAGAGTTTTCCTGTACTCTTTGACGTTTCCAAAGTTGAAAAAAAGGACGTTTTCACCGGAACTTTCATGCCCTCCACCGAATTCACCGGCGGATTCAGAGTTCTTTCCTATCTCGATCCATCCGAGCCCGATCACACCAAACTCAAGCGCCTCCTCTTCTTCCTCCTCCAGTCCAGCCGCGACAGGGTCATCCCAGAGTTCCATTCCTGCTTCTCCGAGCTCTCCGAGACCCTTGAAAGCGAACTCGCAGCAAAAGGCAAAGCCAGTTTCGCCGACCCTAACGATCAGGCATCCTTCAACTTTCTTGCTCGCGCTCTCTACGGCACCAAGCCGGCTGATACCAAACTGGGTACTGACGGGCCTGGCTTAATCACGACATGGGTTGTCTTCCAGTTGAGTCCCATCCTCACTCTAGGCCTACCCAAGTTTATAGAAGAACCCCTTATCCACACTTTTCCACTCCCGGCATTTCTGGCTAAATCAAGTTACCAGAAGCTCTATGACTTCTTCTACGACGCGTCAACTCATGTTCTGGACGAAGGTGAGAAGATGGGGATATCAAGAGAGGAAGCTTGCCACAACCTCCTTTTCGCCACGTGCTTTAATTCCTTCGGAGGGATGAAAATCATCTTTCCAACAATTCTCAAATGGGTCGGTCGAGGAGGAGTGAAACTGCACACCCAATTAGCCCAGGAGATTAGATCTGTCGTCAAATCCAACGGCGGAAAAGTGACCATGGCGTCCATGGAGCAGATGCCGCTGATGAAGTCTACTGTATACGAAGCCTTCCGGATCGAACCCCCTGTCGCATTGCAGTACGGCAAGGCGAAGCAGGATCTGGTGATCGAAAGCCACGACTCTGTTTTTGAAGTCAAAGAAGGTGAAATGTTGTTCGGGTACCAACCGTTCGCCACCAAAGACCCGAAAATCTTCGAACGATCCGAAGAGTTCGTGCCGGATCGGTTCGTGGGTGAGGGTGAGAAGCTGCTGAAGCACGTGCTCTGGTCAAACGGACCTGAAACCGAGAATCCAACCTTGGGGAATAAGCAGTGCGCAGGTAAAGACTTCGTGGTGCTGGCCGCCAGGCTATTTGTGGTGGAGCTGTTCCTGCGTTACGATTCCTTTGACATCGAGGTTGGCACGTCGCTGTTGGGTTCAGCCATCAATCTAACCTCCCTAAAGCGAGCCAGTTTTTGA 1563 0.5067 MASPSLTFPSLQLQFPTHTKSSKPSNHKLIVRPIFASVSEKPSVPVSQSQVTPPGPIRKIPGDYGLPFIGPIKDRLDYFYNQGREEFFRSRAQKHQSTVFRSNMPPGPFISSNSKVIVLLDGKSFPVLFDVSKVEKKDVFTGTFMPSTEFTGGFRVLSYLDPSEPDHTKLKRLLFFLLQSSRDRVIPEFHSCFSELSETLESELAAKGKASFADPNDQASFNFLARALYGTKPADTKLGTDGPGLITTWVVFQLSPILTLGLPKFIEEPLIHTFPLPAFLAKSSYQKLYDFFYDASTHVLDEGEKMGISREEACHNLLFATCFNSFGGMKIIFPTILKWVGRGGVKLHTQLAQEIRSVVKSNGGKVTMASMEQMPLMKSTVYEAFRIEPPVALQYGKAKQDLVIESHDSVFEVKEGEMLFGYQPFATKDPKIFERSEEFVPDRFVGEGEKLLKHVLWSNGPETENPTLGNKQCAGKDFVVLAARLFVVELFLRYDSFDIEVGTSLLGSAINLTSLKRASF* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0972 520 Gene3D Cytochrome P450 54 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0972 520 PRINTS E-class P450 group IV signature 473 491 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0972 520 PRINTS E-class P450 group IV signature 374 390 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0972 520 PRINTS E-class P450 group IV signature 427 445 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0972 520 FunFam Allene oxide synthase, chloroplastic 55 520 - -
Vvi18g0972 520 SUPERFAMILY Cytochrome P450 56 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0972 520 CDD CYP74 89 513 - -
Vvi18g0972 520 Pfam Cytochrome P450 349 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0972 520 PANTHER CYTOCHROME P450 26 54 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0972 Vvi-Chr18 9911314 9912876 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0972 1 520 Cytochrome P450 AT5G42650 65.643 0.0 701
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0972 K01723 - vvi:100267750 1028.47