Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0967 ATGCAATCCTATGTTCACCCACGAGTTGAATCAGCAGCCATGGAGTTCCAACTTCCATTTTCAACGATTGCCATGGCCGCCATGTTCACCTTTCTGTTCCTCTACTATTTTTCAAAGATAGCAAAGAGTTCTGAGAGGAAAAGAACAGCTCCGGAAGCCGCCGGGGCGTGGCCTGTGATCGGTCACCTCCATCTGTTAGGAGGCCCTGAGCTACCCCACAAAACCTTGGGGGCGATGGCCGACAAGTACGGGCCAGTCTTCTTAATCAAACTCGGTGTGCAACGAGTCTTGATGCTGAGTAATTGGGAGATGGCTAAAGAGTGCTTTACCACCAACGATAAAGTCTTCGCCAATCGGCCCAAATCAATAGCAGTGGAGGTCCTGGGATACAACTATGCCATGTTCGGCTTTGGCCCATATGGCTCCTACTGGCGACAAGTACGCAAGATAGTCACTACAGGGCTTCTCTCAAACAGACGACTTGAGATTGTGAAACACGTCTGGATATCAGAGGTGAAGGCGTCAATAAGAGAGCTATATGAGTTATGGATCAATAAAAGAAGTGATTCAAACATGGTGTTGGTGGAGATGAAGGATTGGTTTGGGGACCTATCCCTCAACATGGTTCTTAGAATGCTCTCAGGGGGGCGAGATTCGAGCAGCAAGGAAGAGAGGATGCGGTGCCACAAACTGGTGAGGGATTTTTTCCAATCGATGGGTACTTTTTTGGTGTCGGATGCTCTTCCTCTTTTGAGGTGGTTCGATTTTGGAGGCTATGAGAAGGCCATGAGGAAGACTGCAAAAGATCTAGACCATCTACTTGAGAGCTGGTTACAGCAACATAAATCAAAGCGATCATCTGAGCAGGCGGACGGGAACCAGGATTTTATGGATGTGATGCTGTCCATGTTAGATGACATGGCTACGGACGAAGATTTAAAGGGTTTCGATGCTGATACCATTAACAAAGCTACATGCCTGACAATTCTGGCAGGGGGCACTGACACTGTTACAGTTAGTTTAATATGGGCTCTCTCTTTGCTGTTGAACAAGCCGCAAGTATTGAAAACGGCTCGAGAGGAGTTGGACTCGCATGTAGGAAGGGAAAGGCAAGTTGAGGAACGGGACATGAAAAACCTGGCCTACCTCAATGCTATCGTCAAGGAGACCCTGCGTTTGTATCCAGCTGGTCCACTCACAGCACCACACGAGTCAACGGAGGACTGTCTCCTGGGTGGCTACCATATACCAGCTGGCACACGCCTGCTGGCCAATCTTTGGAAAATTCATCGAGACCCAAGTATATGGTCAGATCCAGATGAGTTCAGGCCAGAGAGATTTCTCACAACTCATAAGGACGTTGATGTCAAGGGTCAACATTTTGAATTGATTCCGTTTGGGAGTGGTAGAAGAATTTGCCCTGGTATATCCTTTGGTCTACAATTTATGCAATTCACACTGGCCAGCTTGATACAAGGGTTTGAGTTTGCAACCATGTCCGATGAACCGGTTGATATGACTGAGAGCATTGGGTTAACCAACCTCAAAGCCACCCCTCTTGAGGTCCTCGTTGCTCCACGCCTGTCATCTGATCTTTATGAATAA 1605 0.4779 MQSYVHPRVESAAMEFQLPFSTIAMAAMFTFLFLYYFSKIAKSSERKRTAPEAAGAWPVIGHLHLLGGPELPHKTLGAMADKYGPVFLIKLGVQRVLMLSNWEMAKECFTTNDKVFANRPKSIAVEVLGYNYAMFGFGPYGSYWRQVRKIVTTGLLSNRRLEIVKHVWISEVKASIRELYELWINKRSDSNMVLVEMKDWFGDLSLNMVLRMLSGGRDSSSKEERMRCHKLVRDFFQSMGTFLVSDALPLLRWFDFGGYEKAMRKTAKDLDHLLESWLQQHKSKRSSEQADGNQDFMDVMLSMLDDMATDEDLKGFDADTINKATCLTILAGGTDTVTVSLIWALSLLLNKPQVLKTAREELDSHVGRERQVEERDMKNLAYLNAIVKETLRLYPAGPLTAPHESTEDCLLGGYHIPAGTRLLANLWKIHRDPSIWSDPDEFRPERFLTTHKDVDVKGQHFELIPFGSGRRICPGISFGLQFMQFTLASLIQGFEFATMSDEPVDMTESIGLTNLKATPLEVLVAPRLSSDLYE* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0967 534 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 466 475 IPR017972 GO:0005506|GO:0016705
Vvi18g0967 534 PRINTS E-class P450 group I signature 341 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0967 534 PRINTS E-class P450 group I signature 384 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0967 534 PRINTS E-class P450 group I signature 321 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0967 534 PRINTS E-class P450 group I signature 463 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0967 534 PRINTS E-class P450 group I signature 80 99 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0967 534 PRINTS E-class P450 group I signature 425 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0967 534 PRINTS E-class P450 group I signature 473 496 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0967 534 PRINTS E-class P450 group I signature 104 125 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0967 534 Coils Coil 355 375 - -
Vvi18g0967 534 Pfam Cytochrome P450 55 511 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0967 534 CDD CYP82 84 527 - -
Vvi18g0967 534 FunFam Cytochrome P450 82C4 40 525 - -
Vvi18g0967 534 Gene3D Cytochrome P450 40 528 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0967 534 PRINTS P450 superfamily signature 385 396 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0967 534 PRINTS P450 superfamily signature 464 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0967 534 PRINTS P450 superfamily signature 332 349 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0967 534 SUPERFAMILY Cytochrome P450 56 527 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0967 534 PANTHER CYTOCHROME P450 82C3-RELATED 28 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0967 Vvi-Chr18 9865523 9867293 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0967 28 533 Cytochrome P450 AT4G31940 48.743 0.0 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0967 - K23136 vvi:100259186 1068.14