Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0966 ATGCTAAGGCGTTCTGAGAGGAAAAGAACTGCCCCGGAAGCCGCCGGGGCATGGCCTGTGATTGGTCACCTCCATCTGTTAGGAGGCTCTGAGCTGCCCCACAAAACCTTGGGGGCTATGGCCGACAAGTACGGGCCGATCTTCTTTATCAAGCTTGGTGCGCGACCAGTATTGGTGGTGAGTAATTGGGAGATTGCTAAGGAGTGCTTTACTACCAACGACAAAGCTTTCGCCAATCGTCCCAAATTAATAGCGGTGGAGGTTATGGGCTACAACAACGCCATGTTCGGCTTTAGCCCATATGGCTCCTACTGGCGCCAGATGCGCAAGATAGTCACTACACATCTTCTCTCAAACAGAAGCCTGGAGATGCTGAAACTGGTACGTATATCGGAGGTGAAGGCAACGATAAAAGAGCTACATGAGTTATGGGTCTCTAAGAAAAGTGATTCAAACATGGTATCAGTGGAGATGAGGCGATGGTTTGGAGATCTAGCCCTAAATTTGGCTGTAAGGATGACTGCCGGGAAGAGATTTTCTAGTGACAAGGAAGGAGTGGAGTACCACAAAGCAATAAGATGTTTTTTTGAGTTGACGGGGAAGTTTATGGTGTCGGATGCTCTCCCTTTTCTAAGGTGGTTTGACTTGGGAGGCTATGAGAAGGCCATGAAGAAGACTGCAAAAAGTCTAGACCATCTACTTGAAGACTGGTTACAGGAACATAAAAGAAAGAGAGTTTCTGGGCAGCCCACTGGGGACCAAGATTTTATGGATGTGATGCTGTCCATTTTAGATGATGAGACCAGGGCCCAAGATATAAAGAGTTCCGATGCCGATATCATTAACAAAGCTACATGCCTGAATGTCTTAATAGCGACCACCGATACTGTTACAGTTAGCCTAACATGGGCTCTGTCGTTACTGTTAAACAACCGACACGTATTGAACAAAGCCAAAGAGGAGCTAGATTTGCATGTGGGAAGGGAAAGGCGAGTCGAGGAACGGGACATGAGCAACCTGGTCTACCTCGATGCTATCATCAAGGAAACTCTGCGTTTATATTCAGCTGTTCAAGTTCTAGCTGCACATGAGTCCACGGAGGAATGCGTTGTAGGTGGCTGCTACATACCCGCTGGGACGCGCCTGATAATTAATCTTTGGAAGATTCACCACGATCCAAGTGTATGGTCGGATCCTGATCAGTTCATGCCTGAGAGATTTCTCACTACGCATAAGGATGTTGATGTTAGAGGTATGCATTTTGAATTGATTCCATTTGGAAGTGGAAGAAGAATTTGCCCTGGAGTGTCCTTAGCTCTACAATTTCTGCAATTCACCCTAGCCAGCTTAATTCAAGGATTTGAGTTTGCAACGGCATCCGATGGACCGGTTGATATGACTGAAAGCATTGGGTTAACCAACCTCAAGGCCACCCCGCTTGACGTTCTCCTCACTCCTCGCCTCTCTTCTAATCTCTATGAGAACATGGCTCAAAGAAAACCTACGAAAGCTAGAACCTTTCAATATGGAACCATATGTCTAAACGAAGTGTTGAATCCAAACCTAAGGTTTAACTCTTTATTTTCTCAAAACCTTTTTGAAGAACATAAGGTTATTGTAGATAATTTTTGGTCTTTAAAACCACAAAGTTTTCCGAACCAAAATTTAGAATACGCTTATGGAAAAACAGTGTCAGCTTTAGCCCAACATTTACAAAACCTTCAAAACCAACTGATTGCTTTAGAAACCCAAAAATTCCAAAACCTCAAAATCCAAGAAAATCAAGAAAAACTGATAGAAGATTTGAAAACCAGTACAGTGTCAACCAATCAAACCAGCTGTTTAAACAGTCAACCTGAAGTAATTAGTTTAATTAAGAAATCAGCTCTTCTGACTGAACAATATGAAAGGCTTGTTGTTAAAAACATAATTGGAGTTGATAACTACTCTTTCGTCAAAACCTTTTTTCTACAAAACCAATATAACAAAGTGTTTAAAAATCAAGAACTTTTGTATAAACATTTTAGAACTAAAAATGTCGGGATAAAAACAGGGTATATGGCATATCACGACCCTGAATTTTTCTTTGTTATATATTTAGCTTATGTAAATATGTCTGTTGTAAATAAAGAAAATTTTGATTTGGTACCGCAACTTATGGATCAGGGAATTTTAAAAAATGTTTTTATGAACCATATATCTCAAATCCCTGAAAATTTCCCAGAAAAATTGAAAGATATTTTAACTTATCTTTTTAAAGCCGAAAAATATATAGATATTTCTTTTGAAACCATTCCACCTTTATTTCAACCCGATGGATCAGTAGTACCAGCCTATCATCATGTATATATAAAACATAATAAAGAACCACTCATCCCTCAACAAGAACCAGAATGGGAAATGACCCGTTCAAATGAATTTCCAGAATTTTTTACTCGCTTTAGAGCTTTTCAAATCTATGATCTTATACCAACCCGGAATAAATTATTTCATCTCATTGGCGAAACAAAAACCATGTCTATATGGAGAATAAAACCTTTAGAACACATCATTGTTCCAAACCCTTTTATTACTTCTGAAGAACAGGATTTTATAACCGAACTCAGTGTAGATATACCGGAACCATCTTCCTACCTCAGCGATGACGCATTATTTTGGGACAACCTGGACGATGAAAGTTATCATAATCTACAAAATGCAATGGAAGGATGA 2712 0.4012 MLRRSERKRTAPEAAGAWPVIGHLHLLGGSELPHKTLGAMADKYGPIFFIKLGARPVLVVSNWEIAKECFTTNDKAFANRPKLIAVEVMGYNNAMFGFSPYGSYWRQMRKIVTTHLLSNRSLEMLKLVRISEVKATIKELHELWVSKKSDSNMVSVEMRRWFGDLALNLAVRMTAGKRFSSDKEGVEYHKAIRCFFELTGKFMVSDALPFLRWFDLGGYEKAMKKTAKSLDHLLEDWLQEHKRKRVSGQPTGDQDFMDVMLSILDDETRAQDIKSSDADIINKATCLNVLIATTDTVTVSLTWALSLLLNNRHVLNKAKEELDLHVGRERRVEERDMSNLVYLDAIIKETLRLYSAVQVLAAHESTEECVVGGCYIPAGTRLIINLWKIHHDPSVWSDPDQFMPERFLTTHKDVDVRGMHFELIPFGSGRRICPGVSLALQFLQFTLASLIQGFEFATASDGPVDMTESIGLTNLKATPLDVLLTPRLSSNLYENMAQRKPTKARTFQYGTICLNEVLNPNLRFNSLFSQNLFEEHKVIVDNFWSLKPQSFPNQNLEYAYGKTVSALAQHLQNLQNQLIALETQKFQNLKIQENQEKLIEDLKTSTVSTNQTSCLNSQPEVISLIKKSALLTEQYERLVVKNIIGVDNYSFVKTFFLQNQYNKVFKNQELLYKHFRTKNVGIKTGYMAYHDPEFFFVIYLAYVNMSVVNKENFDLVPQLMDQGILKNVFMNHISQIPENFPEKLKDILTYLFKAEKYIDISFETIPPLFQPDGSVVPAYHHVYIKHNKEPLIPQQEPEWEMTRSNEFPEFFTRFRAFQIYDLIPTRNKLFHLIGETKTMSIWRIKPLEHIIVPNPFITSEEQDFITELSVDIPEPSSYLSDDALFWDNLDDESYHNLQNAMEG* 904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0966 903 PANTHER CYTOCHROME P450 82C3-RELATED 4 493 - -
Vvi18g0966 903 SUPERFAMILY Cytochrome P450 17 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0966 903 Coils Coil 564 584 - -
Vvi18g0966 903 PRINTS E-class P450 group I signature 41 60 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0966 903 PRINTS E-class P450 group I signature 423 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0966 903 PRINTS E-class P450 group I signature 65 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0966 903 PRINTS E-class P450 group I signature 433 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0966 903 PRINTS E-class P450 group I signature 165 183 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0966 903 PRINTS E-class P450 group I signature 385 409 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0966 903 PRINTS E-class P450 group I signature 301 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0966 903 PRINTS E-class P450 group I signature 344 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0966 903 PRINTS P450 superfamily signature 433 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0966 903 PRINTS P450 superfamily signature 345 356 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0966 903 PRINTS P450 superfamily signature 424 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0966 903 PRINTS P450 superfamily signature 292 309 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0966 903 CDD CYP82 45 487 - -
Vvi18g0966 903 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 426 435 IPR017972 GO:0005506|GO:0016705
Vvi18g0966 903 Gene3D Cytochrome P450 1 482 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0966 903 FunFam Cytochrome P450 82C4 1 485 - -
Vvi18g0966 903 Pfam Cytochrome P450 16 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0966 Vvi-Chr18 9846710 9857922 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0966 11 493 Cytochrome P450 AT4G31940 51.717 9.31e-176 517
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0966 - - vvi:100248962 992.26