Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0965 ATGGCGGTGCCACACTCCAGCAGTCTTCTTCAATACCTAAATGTTACCACGATCGGAGTGCTTGGCATACTTTTTCTTTCCTACTATCTATTAGTACGGAGATCCAGAGCTGGTAAGAGAAGAATAGGACCTGAAGCAGCTGGTGCATGGCCAATAATCGGTCACCTACACCTCTTAGGTGGGTCACAGCTCCCTCATGTAACATTGGGAACCATGGCCGACACATATGGGCCGGTCTTCACAATTCGTCTTGGGGTGCATCGAGCTTTGGTGGTGAGTAGCTGGGAGATGGCTAAAGAATGCTTGACCACCAATGACCAGGCTGCATCCTCGCGTCCCGAACTTTTAGCCTCAAAACATTTGGGCTACAACTACTCCATGTTTGGTTTCTCTCCGTACGGTTCTTACTGGCGTGAAGTGCGCAAGATAATCAGCCTAGAGCTACTCTCTAACCGCCGCCTAGAGCTGCTGAAGGACGTCCGAGCTTCAGAAGTGGTGACATCTATAAAAGAGCTATACGAGCTCTGGGAAGAGAAAAAAAATGAATCGGGCCTTGTCTCGGTGGAGATGAAGCAGTGGTTTGGAGACTTGACTCTGAACGTAATTCTTAGGATGGTGGCAGGGAAGCGTTATTTCAGTGCTTCAGATGCAAGTGAAAATAAACAGGCGCAGAGGTGCCGGAGAGTGTTCAGGGAATTCTGTCATTTGTCAGGGCTCTTTGCGGTGGCGGACGCTATTCCTTTTCTTGGATGGCTAGACTTGGGGAGACATGAGAAGACCCTAAAGAAGACAGCAAAAGAAATGGACAGTATTGCTCAAGAATGGTTAGAGGAGCACCGTCGGAGGAAAGACTCCGGTGAAGTTAATAGTACGCAAGACTTCATGGATGTGATGCTGTCAGTTCTTGATAGCAAAAACCTTGGTGATTACGATGCTGATACCGTCAATAAAGCCACATGCCTGGCTCTAATTGTAGGAGGTAGTGACACAACAGTTGTCACTTTAACTTGGGCGCTCTCTCTTCTATTAAACAATCGTGACACCTTAAAAAAGGCACAAGAAGAATTAGATATTCAAGTTGGCAAGGAAAGATTAGTGAATGAACAAGATATCAGTAAATTGGTCTATCTCCAAGCCATTGTTAAAGAGACATTACGATTATATCCGCCAGCAGCACTTGGAGGACCACGTCAATTCACTGAGGACTGCACCTTGGGTGGTTACCATGTCTCCAAAGGCACCCGATTAATATTGAATCTTTCCAAAATCCAAAAGGATCCAAGAATTTGGATGAGTCCAACAGAATTCCAACCAGAGAGGTTTCTAACCACCCATAAGGACCTTGATCCTCGAGAAAAACATTTTGAATTTATACCATTTGGTGCCGGTAGAAGAGCATGTCCAGGAATAGCTTTCGCTCTTCAAATGCTACATTTAACATTGGCCAATTTCTTACAGGCATTCGACTTTTCAACTCCATCAAATGCACAAGTTGATATGTGCGAGAGCCTTGGACTTACAAACATGAAATCTACCCCACTTGAAGTTCTCATTTCTCCACGCATGTCTTTGTTATATCGGTATACGACGACAAAAAGGCTCAGAGAAGCGTTTAGCGAGTTTGATGGGGCCCAGATTGTCGTAAAGTTTAACAAAGCATGGGGGTCTCTTTGTGACTATGCAATTAAAAAGAACGAACAACCTCTGACTTGGAGGGAAGAAAGCCTCGCCCAAATAAAGGAATGGGTCAATGCCAAGAAAATTCATAGGAAGACCGATACAGAAACAAAACTAAAAAAGATTGATAGGATGTCAAACAAAGAGGATAGGTTCCAAGTTTATGAGGATTTAGTATTTGCGCAAAAGTTCCTATCTTTCTATTCCTCGATCAAGTCTGTTTTCGATGATTTGAAAATCTTAAAAGACATCAAGAGAGAACACCTTATGCTTAAGCTGGAAAAACACCGACAGATCGATCTAACCATGGCGGTGCCACACTCCAGCAGTCTTCTTCAATACCTAAATATTACCACGATCGGAGTGCTTGGCATACTTTTTCTTTCATACTATCTATTAGTACGGAGATCCAGAGCTGGTAAGAGAAGAATAGCACCTGAAGCAGCTGGTGCATGGCCAATAATCGGTCACCTACACCTCTTAGGTGGGTCACAGCTCCCTCATGTAACCTTGGGAACCATGGCCGACAAGTACGGACCGATCTTCACTATCAGGCTCGGGGTGCATCGAGCATTGGTGGTGAGTAGTAGGGAGGTGGCCAAAGAATGTTTCACCACCAATGACTCGGCTGTATCCGGCCGTCCCAAACTGGTAGCCCCAGAACATCTGGGTTACAACTACGCCATGTTCGCTTTCTCCCCTTACGATGCTTACTGGCGTGAAGTGCGAAAGATAGTCAATACAGAGCTACTTTCCAACCGCCGCCTAGAGTTGCTGAAGGACGTTCGAGCCTCAGAGGTGGAGACATCCATAAAAGAACTGTACAAGCTCTGGGCGGAAAAGAAGAACGAATTGGGGCATGTTTTGGTGGAGATGAAGCAATGGTTTGGTGACTTGTCTATGAACGTGATTTTAAGGATGGTTGTTGGAAAAAGATACTTTGGTGTTGGAGCCGGCGGTGAGGAGGAAGAGGCCCGGCGGTGCCAGAAGGCCATTAGGGAATTCTTTCGTTTGCTGGGGCTCTTTGTGGTGAAGGATGGGATTCCTTCCCTCGGATGGTTGGACTTGGGAGGACACGAGAAGGCCATGAAGAAGACTGCAAAAGAAATAGACAGCATTGCTCAAGAATGGTTAGAGGAGCACCGTCGGAGGAAAGATTGGGGTGAAGATAATGGTATGCATGATTTCATGGATGTGTTGCTCTCAGTCCTCGACGGCAAAGCCCTTCCTGAGTACGATGCCGATACCATCAACAAAGCCACTTCCATGGCTCTGATTTCAGGAGGTACTGACACCATGACTGTTACCCTAACATGGGCACTTTCATTGATATTAAACAATCGTGAAACCTTGAAGAAGGCTAAAGAGGAATTGGATACCCATGTTGGCAAAGAAAGATTAGTTAATGCATCGGATATTAGCAAGTTGGTCTATCTTCAAGCAATTGTTAAGGAGACATTACGACTACGTCCTCCCGGACCACTGTCAGGACCACGCCAATTCACCGAAGACTGCATTATTGGTGGTTACCATGTCCCTAAAGGCACCCGACTAGTGTTGAACCTCTCAAAGCTCCATAGGGATCCAAGTGTATGGTTAGACCCTGAAGAGTTTCAGCCAGAGAGATTTCTCACCACCCACAGAGACGTTGATGCTAGGGGTCAGCATTTCCAACTACTGCCATTTGGTGCAGGTAGAAGATCATGCCCTGGAATAACTTTTGCCCTTCAAATGCTACATTTGGCACTGGCTAGTTTCTTACATGGATTTGAGGTCTCAACTCCATCAAATGCACCTGTCGATATGAGCGAGATTCCTGGACTAACAAACATTAAGTCCACCCCACTTGAAATTCTCATAGCTCCTCGCCTGCCTTATAATTCTTATAAATGA 3570 0.4563 MAVPHSSSLLQYLNVTTIGVLGILFLSYYLLVRRSRAGKRRIGPEAAGAWPIIGHLHLLGGSQLPHVTLGTMADTYGPVFTIRLGVHRALVVSSWEMAKECLTTNDQAASSRPELLASKHLGYNYSMFGFSPYGSYWREVRKIISLELLSNRRLELLKDVRASEVVTSIKELYELWEEKKNESGLVSVEMKQWFGDLTLNVILRMVAGKRYFSASDASENKQAQRCRRVFREFCHLSGLFAVADAIPFLGWLDLGRHEKTLKKTAKEMDSIAQEWLEEHRRRKDSGEVNSTQDFMDVMLSVLDSKNLGDYDADTVNKATCLALIVGGSDTTVVTLTWALSLLLNNRDTLKKAQEELDIQVGKERLVNEQDISKLVYLQAIVKETLRLYPPAALGGPRQFTEDCTLGGYHVSKGTRLILNLSKIQKDPRIWMSPTEFQPERFLTTHKDLDPREKHFEFIPFGAGRRACPGIAFALQMLHLTLANFLQAFDFSTPSNAQVDMCESLGLTNMKSTPLEVLISPRMSLLYRYTTTKRLREAFSEFDGAQIVVKFNKAWGSLCDYAIKKNEQPLTWREESLAQIKEWVNAKKIHRKTDTETKLKKIDRMSNKEDRFQVYEDLVFAQKFLSFYSSIKSVFDDLKILKDIKREHLMLKLEKHRQIDLTMAVPHSSSLLQYLNITTIGVLGILFLSYYLLVRRSRAGKRRIAPEAAGAWPIIGHLHLLGGSQLPHVTLGTMADKYGPIFTIRLGVHRALVVSSREVAKECFTTNDSAVSGRPKLVAPEHLGYNYAMFAFSPYDAYWREVRKIVNTELLSNRRLELLKDVRASEVETSIKELYKLWAEKKNELGHVLVEMKQWFGDLSMNVILRMVVGKRYFGVGAGGEEEEARRCQKAIREFFRLLGLFVVKDGIPSLGWLDLGGHEKAMKKTAKEIDSIAQEWLEEHRRRKDWGEDNGMHDFMDVLLSVLDGKALPEYDADTINKATSMALISGGTDTMTVTLTWALSLILNNRETLKKAKEELDTHVGKERLVNASDISKLVYLQAIVKETLRLRPPGPLSGPRQFTEDCIIGGYHVPKGTRLVLNLSKLHRDPSVWLDPEEFQPERFLTTHRDVDARGQHFQLLPFGAGRRSCPGITFALQMLHLALASFLHGFEVSTPSNAPVDMSEIPGLTNIKSTPLEILIAPRLPYNSYK* 1190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0965 1189 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 1121 1130 IPR017972 GO:0005506|GO:0016705
Vvi18g0965 1189 CDD CYP82 738 1182 - -
Vvi18g0965 1189 Gene3D Cytochrome P450 33 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0965 1189 Gene3D Cytochrome P450 694 1180 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0965 1189 SUPERFAMILY Cytochrome P450 710 1182 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0965 1189 PRINTS P450 superfamily signature 458 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0965 1189 PRINTS P450 superfamily signature 467 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0965 1189 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0965 1189 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0965 1189 CDD CYP82 77 521 - -
Vvi18g0965 1189 PRINTS E-class P450 group I signature 378 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0965 1189 PRINTS E-class P450 group I signature 457 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0965 1189 PRINTS E-class P450 group I signature 467 490 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0965 1189 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0965 1189 PRINTS E-class P450 group I signature 73 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0965 1189 PRINTS E-class P450 group I signature 97 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0965 1189 PRINTS E-class P450 group I signature 197 215 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0965 1189 PRINTS E-class P450 group I signature 419 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0965 1189 Pfam Cytochrome P450 48 504 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0965 1189 Pfam Cytochrome P450 709 1167 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0965 1189 FunFam Cytochrome P450 82C4 694 1180 - -
Vvi18g0965 1189 SUPERFAMILY Cytochrome P450 49 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0965 1189 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 460 469 IPR017972 GO:0005506|GO:0016705
Vvi18g0965 1189 PANTHER CYTOCHROME P450 82C3-RELATED 19 523 - -
Vvi18g0965 1189 FunFam Cytochrome P450 82C4 33 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0965 Vvi-Chr18 9827989 9838612 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0965 23 522 Cytochrome P450 AT4G31940 53.543 0.0 556
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0965 - - vvi:100266133 1047.34