Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0963 ATGGACAGTATTGCTCAAGAATGGTTAGAGGAGCACCGTCGGAGGAAAGACTCCGGTGAAGTTAATAGTACGCAAGACTTCATGGATGTGATGTTGTCAGTTCTTGATGGCAAAATCCTTGGTGATTACGATGCTGATACCGTCAATAAAGCCACATGCCTAGCTCTAATTGTAGGAGGTAGTGACACAACAGTTGTCACTTTAACTTGGGCGCTCTCTCTTCTATTAAATAATCGTGACACCTTGAAAAAGGCACAAGAAGAATTAGATATTCAAGTTGGCAAGGAAAGATTAGTGAATGAACAAGATATCAGTAAATTGGTCTATCTCCAAGCCATTGTTAAAGAGACATTACGATTATATCCGCCAGCGGCACTTGGAGGACCACGTCAATTCACTGAGGACTGCACCTTGGGTGGTTACCATGTCTCCAAAGGCACCTGA 444 0.4302 MDSIAQEWLEEHRRRKDSGEVNSTQDFMDVMLSVLDGKILGDYDADTVNKATCLALIVGGSDTTVVTLTWALSLLLNNRDTLKKAQEELDIQVGKERLVNEQDISKLVYLQAIVKETLRLYPPAALGGPRQFTEDCTLGGYHVSKGT* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0963 147 Pfam Cytochrome P450 3 147 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0963 147 Gene3D Cytochrome P450 1 147 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0963 147 PRINTS E-class P450 group I signature 48 65 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0963 147 PRINTS E-class P450 group I signature 68 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0963 147 PRINTS E-class P450 group I signature 111 129 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0963 147 PRINTS P450 superfamily signature 112 123 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0963 147 PRINTS P450 superfamily signature 59 76 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0963 147 SUPERFAMILY Cytochrome P450 2 147 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0963 147 PANTHER CYTOCHROME P450 82C3-RELATED 1 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0963 Vvi-Chr18 9817239 9818372 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0963 1 147 Cytochrome P450 AT4G31940 58.000 1.64e-52 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0963 - - vvi:100260929 288.885