Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0962 ATGGCTAAAGAATGCTTGACCACCAATGACCAGGCTGCATCCTCGCGTCCCGAACTTTTAGCCTCAAAACATTTGGGCTACAACCACGCCATGTTTGGTTTCTCTCCGTACGGTTCTTACTGGCGTGAAGTGCGCAAGATAATCAACCTAGAGCTACTCTCTAACCGCCGCCTAGAGCTGCTGAAGGACGTCCGAGCTTCAGAAGTGGTGACATCCATAAAAGAGCTATACGAGCTCTGGGAAGAGAAAAAAAATGAATCGGGCCTTGTCTCGGTGGAGATGAAGCAGTGGTTTGGAGACTTGACTCTGAACGTAATTCTTAGGATGGTGGCAGGGAAGCGTTATTTCAGTGCTTCAGATGCAAGTGAAAATAAACAGGCGCAGAGGTGCCGGAGAGTGTTCAGGGAATTCTTTCATTTGTAA 423 0.4799 MAKECLTTNDQAASSRPELLASKHLGYNHAMFGFSPYGSYWREVRKIINLELLSNRRLELLKDVRASEVVTSIKELYELWEEKKNESGLVSVEMKQWFGDLTLNVILRMVAGKRYFSASDASENKQAQRCRRVFREFFHL* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0962 140 Pfam Cytochrome P450 2 129 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0962 140 Gene3D - 1 111 - -
Vvi18g0962 140 PANTHER CYTOCHROME P450 82C3-RELATED 1 140 - -
Vvi18g0962 140 SUPERFAMILY Cytochrome P450 1 137 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0962 Vvi-Chr18 9816726 9817148 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0962 1 140 Cytochrome P450 AT4G31940 50.350 1.06e-48 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0962 - - vvi:100260929 263.462