Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0959 ATGTATTTCCTTCTCCAATACCTAAACATCACCACGGTCGGAGTCTTTGCCACACTTTTCCTTTCCTACTGTCTATTATTATGGAGGTCTAGAGCTGGTAACAAAAAAATAGCACCTGAAGCTGCTGCTGCATGGCCCATAATCGGTCACCTACACCTGTTAGCTGGTGGTTCTCATCAGCTTCCCCACATAACCTTGGGAAACATGGCCGACAAATATGGACCGGTCTTCACAATTCGGATTGGGTTGCATCGAGCTGTGGTGGTAAGTTCTTGGGAGATGGCTAAAGAATGCTCGACCGCCAATGACCAGGTTTCATCCTCGCGTCCCGAACTTTTAGCCTCAAAACTTTTGGGCTACAACTACGCCATGTTTGGTTTCTCTCCATACGGTTCTTACTGGCGTGAAATGCGCAAGATAATCAGCCTAGAGCTACTCTCTAACAGCCGCTTAGAGCTGCTGAAGGACGTCCGAGCTTCAGAAGTGGTGACATCCATAAAAGAGCTATACAAGCTCTGGGCAGAGAAAAAAAATGAATCGGGCCTTGTCTCGGTGGAGATGAAGCAGTGGTTTGGAGACTTGACTCTGAACGTAATTCTTAGGATGGTGGCAGGGAAGCGTTATTTCAGTGCTTCAGATGCAAGTGAAAATAAACAGGCGCAGAGGTGCCGGAGAGTGTTCAGGGAATTCTTTCATTTGTCAGGGCTCTTTGTGGTGGCGGACGCTATTCCATTTCTTGGATGGCTCGACTGGGGGAGACATGAGAAAACCCTAAAGAAGACAGCAATAGAAATGGACAGTATTGCTCAAGAATGGTTAGAGGAGCACCGTCGGAGGAAAGACTCCGGTGATGATAATAGTACGCAAGACTTCATGGATGTGATGCAGTCAGTTCTTGATGGCAAAAACCTTGGTGGTTACGACGCTGATACCATCAATAAAGCCACATGCCTGACTCTAATCTCCGGAGGTAGCGACACAACTGTTGTCTCTCTAACATGGGCACTCTCTCTTGTACTAAACAACCGTGACACCTTAAAAAAAGCTCAAGAAGAATTAGACATCCAAGTTGGTAAGGAAAGATTAGTGAATGAACAAGATATAAGTAAGTTGGTCTATCTCCAAGCCATTGTTAAAGAGACATTACGGTTATATCCACCAGGACCACTTGGAGGACTACGCCAATTTACCGAGGATTGCACCTTGGGTGGATACCATGTCTCTAAAGGCACCCGTTTAATAATGAACCTTTCGAAGATCCAAAAGGATCCAAGAATTTGGTCAGATCCGACAGAATTCCAACCAGAGAGGTTTCTCACCACCCATAAAGATGTTGATCCTCGGGGAAAACATTTTGAGTTTATACCATTTGGAGCTGGTCGAAGAGCATGTCCAGGAATAACTTTTGGTCTTCAAGTATTACATTTAACATTGGCTAGTTTCTTACATGCGTTTGAATTTTCAACTCCATCAAATGAACAGGTCAATATGCGCGAGAGCCTTGGACTTACAAATATGAAATCTACCCCACTTGAAGTTCTCATTTCTCCACGCTTATCTTCTTGTAGTCTTTACAATTAA 1581 0.4453 MYFLLQYLNITTVGVFATLFLSYCLLLWRSRAGNKKIAPEAAAAWPIIGHLHLLAGGSHQLPHITLGNMADKYGPVFTIRIGLHRAVVVSSWEMAKECSTANDQVSSSRPELLASKLLGYNYAMFGFSPYGSYWREMRKIISLELLSNSRLELLKDVRASEVVTSIKELYKLWAEKKNESGLVSVEMKQWFGDLTLNVILRMVAGKRYFSASDASENKQAQRCRRVFREFFHLSGLFVVADAIPFLGWLDWGRHEKTLKKTAIEMDSIAQEWLEEHRRRKDSGDDNSTQDFMDVMQSVLDGKNLGGYDADTINKATCLTLISGGSDTTVVSLTWALSLVLNNRDTLKKAQEELDIQVGKERLVNEQDISKLVYLQAIVKETLRLYPPGPLGGLRQFTEDCTLGGYHVSKGTRLIMNLSKIQKDPRIWSDPTEFQPERFLTTHKDVDPRGKHFEFIPFGAGRRACPGITFGLQVLHLTLASFLHAFEFSTPSNEQVNMRESLGLTNMKSTPLEVLISPRLSSCSLYN* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0959 526 Gene3D Cytochrome P450 30 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0959 526 PRINTS E-class P450 group I signature 312 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0959 526 PRINTS E-class P450 group I signature 375 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0959 526 PRINTS E-class P450 group I signature 464 487 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0959 526 PRINTS E-class P450 group I signature 94 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0959 526 PRINTS E-class P450 group I signature 454 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0959 526 PRINTS E-class P450 group I signature 332 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0959 526 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0959 526 PRINTS E-class P450 group I signature 194 212 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0959 526 PRINTS E-class P450 group I signature 416 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0959 526 CDD CYP82 74 518 - -
Vvi18g0959 526 Pfam Cytochrome P450 42 503 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0959 526 PRINTS P450 superfamily signature 376 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0959 526 PRINTS P450 superfamily signature 323 340 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0959 526 PRINTS P450 superfamily signature 455 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0959 526 FunFam Cytochrome P450 82C4 28 516 - -
Vvi18g0959 526 PANTHER CYTOCHROME P450 82C3-RELATED 15 521 - -
Vvi18g0959 526 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 457 466 IPR017972 GO:0005506|GO:0016705
Vvi18g0959 526 SUPERFAMILY Cytochrome P450 44 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0959 Vvi-Chr18 9794763 9797055 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0959 38 519 Cytochrome P450 AT4G31940 53.579 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0959 - - vvi:109121583 1033.86