Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0958 ATGGATTTTCTTCTCCAATGCCTAAACCCTGTCATGGTTGGAGCGTTTGCAATACTCGTCCTCTCATACCACCTGTTATTATGGAGGACTGGAGCTGGTAAGAGCAGAATGGCACCTGAAGCTTCTGGTGCATGGCCCATAATAGGTCACCTGCACCTGTTAGGTGGATCTAAGAATTTGCCTCACTTACTTTTTGGAACCATGGCCGACAAGTATGGACCAGTATTCAGCATCCGGCTGGGATTAAAAAGAGCTGTGGTGGTGAATAGTTGGGAGATGGCCAAGGAATGCTTCACCACCCATGACCTGGCTCTGGCCTCCCGTCCTGAGGTTGAGGCCGCCAAATATTTGGGATATAACTATGCCATGTTTGCTTTCTCTCCTCACGGTGCATACTGGCGTGAAGTGCGTAAGATAGCTACTCTAGAGCTACTCTCGAATCGCCGGCTAGAATTGCTGAAGAATGTCCGAATCTCAGAGGTGGAGACATGCATGAAGGAACTATACAAGCTTTGGGCAGAGAAGAAAAACGAAGCGGGCGTTGTTTTGGTGGACATGAAGGAATGGTTTGGGCACTTGACTCTGAACGTGATTCTTATGATGGTTGCTGGAAAACGATATTTCGGTTATACAGGCGAAAGTAAAGAGAAAGAGGCCCAGCAGTGCCGGAAAGCGATTAGGGAATTCTTTCGTTTGTGGGGACTCTTTGTGGTGTCAGATGCCATTCCTTTTTTTGGATGGCTTGACGTGGGTGGACATCTGAAAGCCATGAAGAAGACTGCAAAAGAACTGGACGGTATTGCTCAGGAATGGTTAGAGGAACACCGGCAGCGAAAAGATTCTGGTGAAGCTGATGGTAACCAGGACTTCATGGACGTGACGCTGTCCATTCTGGGTGGTAGAGACATTACTGATTATGATGCTGATACCATCAACAAAGCTACAGCCCTGATTCTGATTGGAGGAGGCACTGACACTACATCTGCTACTTTAACATGGGTCATCTCACTTTTATTAAACAATCCAGATGTATTAAGAAAAGCCCAAGAAGAATTGGATGCTCATGTTGGTAAAGAAAGACTAGTAAATGAAATGGATATAAGCAAGTTGGTCTACCTTCAAGCAATTGTTAAAGAGACATTGAGGATAAATCCAACAGCTCCACTTTCAGGACCGCGTCAATTCATCCAAGATTCTATTTTAGGGGGTTACCATATCTCAAAAGGCACTCGTCTTATATTGAACCTTACCAAGATCCAAAGAGACCCAAGAGTATGGTTGAATCCAATGGAGTTCCAACCAGATAGATTCCTCACCACCCATAAAGATGTTGATGTTAGAGGTAAACAATTTGAGTTGACACCATTTGGAGGTGGAAGAAGAATTTGCCCTGGAGCAGTTTTTGCCCTTCAAGTGCTACACTTAACATTAGCCAACTTCCTGCATAGATTTCAACTTTCAACTCCATCAGATGCACCGGTTGATATGAGCGAGAGTTTTGGATTAACAAACATCAAATCCACTCCACTTGAAGTTCTTATCTCCCCACGCTTGGCTTCTTATGATCTTTATGAGTAG 1578 0.4461 MDFLLQCLNPVMVGAFAILVLSYHLLLWRTGAGKSRMAPEASGAWPIIGHLHLLGGSKNLPHLLFGTMADKYGPVFSIRLGLKRAVVVNSWEMAKECFTTHDLALASRPEVEAAKYLGYNYAMFAFSPHGAYWREVRKIATLELLSNRRLELLKNVRISEVETCMKELYKLWAEKKNEAGVVLVDMKEWFGHLTLNVILMMVAGKRYFGYTGESKEKEAQQCRKAIREFFRLWGLFVVSDAIPFFGWLDVGGHLKAMKKTAKELDGIAQEWLEEHRQRKDSGEADGNQDFMDVTLSILGGRDITDYDADTINKATALILIGGGTDTTSATLTWVISLLLNNPDVLRKAQEELDAHVGKERLVNEMDISKLVYLQAIVKETLRINPTAPLSGPRQFIQDSILGGYHISKGTRLILNLTKIQRDPRVWLNPMEFQPDRFLTTHKDVDVRGKQFELTPFGGGRRICPGAVFALQVLHLTLANFLHRFQLSTPSDAPVDMSESFGLTNIKSTPLEVLISPRLASYDLYE* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0958 525 Pfam Cytochrome P450 43 503 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0958 525 PANTHER CYTOCHROME P450 82C3-RELATED 15 520 - -
Vvi18g0958 525 FunFam Cytochrome P450 82C4 29 515 - -
Vvi18g0958 525 SUPERFAMILY Cytochrome P450 44 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0958 525 PRINTS E-class P450 group I signature 453 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0958 525 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0958 525 PRINTS E-class P450 group I signature 193 211 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0958 525 PRINTS E-class P450 group I signature 93 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0958 525 PRINTS E-class P450 group I signature 331 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0958 525 PRINTS E-class P450 group I signature 311 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0958 525 PRINTS E-class P450 group I signature 374 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0958 525 PRINTS E-class P450 group I signature 415 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0958 525 PRINTS E-class P450 group I signature 463 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0958 525 PRINTS P450 superfamily signature 463 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0958 525 PRINTS P450 superfamily signature 454 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0958 525 PRINTS P450 superfamily signature 322 339 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0958 525 PRINTS P450 superfamily signature 375 386 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0958 525 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 456 465 IPR017972 GO:0005506|GO:0016705
Vvi18g0958 525 Gene3D Cytochrome P450 32 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0958 525 CDD CYP82 73 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0958 Vvi-Chr18 9789032 9791275 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0958 18 518 Cytochrome P450 AT4G31940 55.118 0.0 558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0958 - K23136 vvi:100252330 1051.97