Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0956 ATGGTTGGAGCGTTTGCAATACTCGTCCTCTCATACCACCTGTTATTATGGAGGTCTGGAGCTGGTAAGAGCAGAATGGCACCTGAAGCTTCTGGTGCATGGCCCATAATAGGCCACCTGCACCTGTTAGGTGGATCTAAGAATTTGCCTCACTTACTTTTTGGAACCATGGCCGACAAGTATGGACCAGTATTCAGCATCCGGCTGGGATTAAAAAGAGCTGTGGTTGTGAGTAGTTGGGAAATGGCCAAAGAATGCTTCACCACCCATGACCTGGCTCTGGCCTCCCGTCCTGAGCTTGTGGCCGCCAAATATTTGGGATATAACTATGCCATGTTTGGTTTATCTCCTCACGGTGCATACTGGCGTGAAGTGCGTAAGATAGCCACTCTAGAGCTACTCTCGAACCGCCGGCTAGAGTTGCTGAAGAATGTCCGAATCTCAGAGGTGGAGACATGCATGAAGGAACTATACGAGCTTTGGGCAAAGAAGAAAAGCGAAGCAGGCGTTGTTTTGGTGGACATGAAGCAATGGTTTGGGCACTTGTCTCTGAACGTGATTCTTAAGATGGTTGTTGGAAAACGATATTTCGGTTATGCAGCCGAAAGTAAAGAGAAAGAGGCCCAGCAGTTCCAGAAGGCGATTAGGGAATTCTTTCGTTTGATGGGACTCTTTGTGGTGTCGGATGCCATTCCTTTTCTTGGATGGCTTGACGTGGGTGGACATGTGAAAGCCATGAAGAAGACTGCAAAAGAATTGGACGGTATTACTCAGGAATGGTTAGAGGAACACCGACGGCGAAAAGATTCGGGTGAAGCTGATGGTGACCAGGACTTCATGGACGTGATGCTGTCCATTCTGGGTGGTAGAGACACTACTGATTATGATGCTGATACCATCAACAAAGCTACATCCCTGGTTATGATTGGAGGAGGCGCTGACACTACATCTGGTACTTTAACATGGGCAGTCTCACTTTTATTGAACAATCCACACATATTAAGAAAAGCTCAAGAAGAATTGGATGCTCATGTTGGTAAAGAAAGACTAGTAAATGAAATGGATATAAGCAAGTTGGTTTACCTTCAAGCAATTGTTAAAGAGACATTGAGGTTAAATCCAATAGCCCCACTTTCAGGACCGCGTCAATTCATCCAAGATTCTATTTTAGGTGGTTACCATATCTCAAAAGGCACTCGTCTTATATTGAACCTTACCAAGATTCAAAGAGACCCGAGAGTATGGTTGAACCCAATGGAGTTCCAACCAGATAGATTCCTCACCACCCACAAAGATGTTGATGTTAGAGGTAAACATTTTGAGTTGACACCATTTGGTGGTGGAAGAAGAATTTGCCCTGGAATAGTTTTTGCCCTTCAAGTGCTACACTTAACATTAGCCAACTTCCTGCATAGATTTCAACTTTCAACTCCATCAGATGCACCGGTTGATATGAGCGAGGGTTTTGGATTAACAAACATCAAATCCACTCCACTTGAAGTTCTTATCTCCCCACGCTTAGCTTCTTATGATCTTTATGAGTAG 1545 0.4466 MVGAFAILVLSYHLLLWRSGAGKSRMAPEASGAWPIIGHLHLLGGSKNLPHLLFGTMADKYGPVFSIRLGLKRAVVVSSWEMAKECFTTHDLALASRPELVAAKYLGYNYAMFGLSPHGAYWREVRKIATLELLSNRRLELLKNVRISEVETCMKELYELWAKKKSEAGVVLVDMKQWFGHLSLNVILKMVVGKRYFGYAAESKEKEAQQFQKAIREFFRLMGLFVVSDAIPFLGWLDVGGHVKAMKKTAKELDGITQEWLEEHRRRKDSGEADGDQDFMDVMLSILGGRDTTDYDADTINKATSLVMIGGGADTTSGTLTWAVSLLLNNPHILRKAQEELDAHVGKERLVNEMDISKLVYLQAIVKETLRLNPIAPLSGPRQFIQDSILGGYHISKGTRLILNLTKIQRDPRVWLNPMEFQPDRFLTTHKDVDVRGKHFELTPFGGGRRICPGIVFALQVLHLTLANFLHRFQLSTPSDAPVDMSEGFGLTNIKSTPLEVLISPRLASYDLYE* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0956 514 PRINTS P450 superfamily signature 452 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0956 514 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0956 514 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0956 514 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0956 514 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0956 514 PRINTS E-class P450 group I signature 404 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0956 514 PRINTS E-class P450 group I signature 82 103 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0956 514 PRINTS E-class P450 group I signature 58 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0956 514 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0956 514 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0956 514 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0956 514 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0956 514 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0956 514 SUPERFAMILY Cytochrome P450 33 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0956 514 Pfam Cytochrome P450 32 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0956 514 CDD CYP82 62 506 - -
Vvi18g0956 514 PANTHER CYTOCHROME P450 82C3-RELATED 4 509 - -
Vvi18g0956 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
Vvi18g0956 514 FunFam Cytochrome P450 82C4 18 504 - -
Vvi18g0956 514 Gene3D Cytochrome P450 21 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0956 Vvi-Chr18 9756283 9758781 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0956 7 507 Cytochrome P450 AT4G31940 55.118 0.0 558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0956 - - vvi:100257363 1024.62