Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0954 ATGGATGGTATTGCTCAGGAATGGTTAGAGGAACACCGACAGCGAAAAGATTCGGGTGAAGCTAATGGTAACCAGGACTTAATGGACGTGATGCTGTCCATTCTGGCTGGCACGGACCCTACCGGCTATGATGCCGATACAATCAACAAAGCCACATCCCTGATTTTGATTGCAGGAGGCAGTGACACTACATCTGTTACTCTAACATGGGCGATCTCACTTTTATTGAATAATCCATGTATGTTAAGAAAAGCCCAAGAAGAATTGGACACTCATGTTGGTAAAGGGAGATTGGTAAATGAAGTGGATTTAAGCAAGTTGGTCTACCTCCAAGCAATTGTTAAAGAGACATTGAGGTTATATCCCGCATTTCCACTTTCAGGACCACGCCAATTTAACCAAGATTCCATTTTAGGTGGTTACCGTATCCCAAAAGGCACTCGTCTTGTGTTGAACCTCACTAAGATCCAAAGAGACCCAAGTATATGGTTGAACCCAACAGAGTTTCAACCAGAAAGATTCCTCACTACTCACAAAGACATTGATATGAGGGTCAAAAATTTTGAGTTTACACCATTTGGTGGTGGAAGAAGAATTTGCCCTGGTGCAACTTTTGCCCTTCAAGTGCTACACTTAACATTAGCCAATTTCTTGCACAAATTTCAACTTTCGACTCCATCAGATGCAACAGTTGATATGAGCGAGAGCCTTGGGATAACAAACATCAAATCCACTCCACTTGAAGTTCTCATCTCGCCACTACTTTACAATTCGGATTGGGTTGCATCGAGCTTTGGTGGTAACTACTTGGGAGATGGCTAA 822 0.427 MDGIAQEWLEEHRQRKDSGEANGNQDLMDVMLSILAGTDPTGYDADTINKATSLILIAGGSDTTSVTLTWAISLLLNNPCMLRKAQEELDTHVGKGRLVNEVDLSKLVYLQAIVKETLRLYPAFPLSGPRQFNQDSILGGYRIPKGTRLVLNLTKIQRDPSIWLNPTEFQPERFLTTHKDIDMRVKNFEFTPFGGGRRICPGATFALQVLHLTLANFLHKFQLSTPSDATVDMSESLGITNIKSTPLEVLISPLLYNSDWVASSFGGNYLGDG* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0954 273 Pfam Cytochrome P450 3 239 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0954 273 SUPERFAMILY Cytochrome P450 2 252 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0954 273 Gene3D Cytochrome P450 1 252 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0954 273 PRINTS P450 superfamily signature 112 123 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0954 273 PRINTS P450 superfamily signature 59 76 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0954 273 PRINTS P450 superfamily signature 191 200 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0954 273 PRINTS P450 superfamily signature 200 211 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0954 273 FunFam Uncharacterized protein 1 256 - -
Vvi18g0954 273 PRINTS E-class P450 group I signature 48 65 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0954 273 PRINTS E-class P450 group I signature 200 223 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0954 273 PRINTS E-class P450 group I signature 68 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0954 273 PRINTS E-class P450 group I signature 152 176 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0954 273 PRINTS E-class P450 group I signature 111 129 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0954 273 PRINTS E-class P450 group I signature 190 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0954 273 PANTHER CYTOCHROME P450 82C3-RELATED 1 255 - -
Vvi18g0954 273 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 193 202 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0954 Vvi-Chr18 9738553 9741982 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0954 1 253 Cytochrome P450 AT4G31940 56.420 7.87e-96 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0954 - - vvi:100252231 509.99