Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0950 ATGGATGGTATTGCTCAGGAATGGTTAGAGGAACACCGACGGCGAAAAGATTCGGGTGAAGCTAGTGGTAACCAGGACTTAATGGACGTGATGCTGTCCATTCTGGCTGGCACGGACCCTACCGGCTATGATGCCGACACAATCAACAAAGCCACATCCCTGATTTTGATTGCAGGAGGCAGTGACACTACATCTGTTACTCTAACATGGGTGATCTCACTTTTATTGAATAATCCATGTATGTTAAGAAAAGCCCAAGAAGAATTGGACACTCATGTTGGTAAAGGGAGACTGGTAAATGAAGTGGATTTAAGCAAGTTGGTCTACCTCCAAGCAATTGTTAAAGAGACATTGAGGTTATATCCCGCACTTCCACTTTCAGGACCACGCCAATTTAACCAAGATTCCATTTTAGGTGGTTATCGTATCCCAAATGGCACTCGTCTTGTATTGAACCTCACTAAGATCCAAAGAGACCCAAGTGTATGGTTGAATCCAACAGAGTTTCAACCAGAGAGATTCCTCACTACTCACAAAGACGTTGATATGAGGGGCAAAAATTTTGAGTTTACACCATTTGGTGGTGGAAGAAGAATTTGCCCTGGTGCAACTTTTGCCCTTCAAGTGCTACACTTAACATTAGCCAATTTCCTACACAAATTTCAACTTTCGACTCCATCAAATGCAACAGTTGATATGAGCGAGAGCCTTGGGATAACAAACATCAAATCCACTCCACTTGAAGTTCTCATCTCGCCACGTCTGTCTTCTTGTGATCTTTATGAGTAA 789 0.4284 MDGIAQEWLEEHRRRKDSGEASGNQDLMDVMLSILAGTDPTGYDADTINKATSLILIAGGSDTTSVTLTWVISLLLNNPCMLRKAQEELDTHVGKGRLVNEVDLSKLVYLQAIVKETLRLYPALPLSGPRQFNQDSILGGYRIPNGTRLVLNLTKIQRDPSVWLNPTEFQPERFLTTHKDVDMRGKNFEFTPFGGGRRICPGATFALQVLHLTLANFLHKFQLSTPSNATVDMSESLGITNIKSTPLEVLISPRLSSCDLYE* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0950 262 SUPERFAMILY Cytochrome P450 2 254 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0950 262 PRINTS P450 superfamily signature 59 76 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0950 262 PRINTS P450 superfamily signature 191 200 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0950 262 PRINTS P450 superfamily signature 112 123 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0950 262 PRINTS P450 superfamily signature 200 211 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0950 262 PANTHER CYTOCHROME P450 82C3-RELATED 1 257 - -
Vvi18g0950 262 Gene3D Cytochrome P450 1 254 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0950 262 FunFam Uncharacterized protein 1 256 - -
Vvi18g0950 262 Pfam Cytochrome P450 3 239 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0950 262 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 193 202 IPR017972 GO:0005506|GO:0016705
Vvi18g0950 262 PRINTS E-class P450 group I signature 152 176 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0950 262 PRINTS E-class P450 group I signature 111 129 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0950 262 PRINTS E-class P450 group I signature 68 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0950 262 PRINTS E-class P450 group I signature 190 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0950 262 PRINTS E-class P450 group I signature 200 223 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0950 262 PRINTS E-class P450 group I signature 48 65 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0950 Vvi-Chr18 9706791 9708470 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0950 1 255 Cytochrome P450 AT4G31940 55.985 1.89e-96 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0950 - - vvi:100241969 525.783