Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0949 ATGCATGCCTGTTCGTCACGGCCATCAACAATGGATCCTGCTCTACATTTGCCTGCATTTTTTGTGTTTCTTTCTTTAATCTATGTCTTCTATGCAATGCTTGGAAGGAAAAAGATAATAAAAAGTAGTAAGAGCAGGGACGCTCCCGAACCAGGTGGTGCATGGCCAATTATTGGCCACCTCCATCTACTAGGAGGAGGTGATCAGCTTCTTTACCGTACACTTGGAGCCATGGCTGATAAGTATGGTCCGGCATTCAATATCCGCCTCGGCAGTCGCCGTGCTTTTGTGGTGAGTAGTTGGGAAGTAGCGAAGGAATGCTTCACCATTAATGACAAAGCACTTGCTACGCGTCCCACTACAGTAGCCGCAAAGCACATGGGCTACAACTATGCGGTATTTGGTTTTGCACCCTACAGCCCTTTCTGGCGTGAGATGCGGAAGATTGCAACACTTGAACTTCTTTCAAATCGTCGGCTTGAGATTCTAAAGCATGTTCGAACTTCAGAAGTTGACATGGGGATTAGGGAACTGTACGGTTTGTGGGTCAAAAACAGCTCCCGTCCATTGCTTGTTGAACTTAATCGATGGTTGGAAGATATGACACTTAACGTGATTGTTAGAATGGTGGCTGGAAAAAGATACTTTGGTGCTGCCGCTGCCTCCGACAGCAGTGAGGCAAGACGGTGCCAGAAAGCAATTAGCCAATTCTTTCGTCTAATCGGCATTTTTGTGGTTTCAGATGCACTTCCATTTCTATGGTGGCTGGATTTGCAGGGGCATGAGAGGGCAATGAAGACGACGGCCAAAGAATTGGATTCCATACTTGAAGGCTGGCTTGAGGAGCATCGCCAAAGAAGAGTTTCTAGTCTGATCAAGGCCGAGGGTGAGCAAGACTTCATTGACGTCATGTTGTCCCTTCAGGAGGAAGGGCGCCTCTCTGGTTTTCAGTATGATTCCGAAACAAGCATCAAGTCCACTTGCCTGGCACTAATCCTAGGTGGCAGTGACACCACAGCAGGCACACTGACGTGGGCCATTTCTTTACTCCTGAACAATCGCCACGCCTTGAAAAAGGCACAAGAAGAACTAGATCTGTGTGTTGGCATGGAAAGGCAAGTGGAAGAGTCAGACGTTAAAAACCTTGTGTATCTTCAAGCAATCATCAAGGAGACCCTTCGCCTCTACCCAGCAGGTCCCCTACTAGGACCCCGAGAGGCGTTGGACGATTGCACAGTCGCTGGCTACAATGTCCCTGCTGGCACTCGCTTAATAGTGAACATATGGAAGCTTCAAAGGGATCCAAGTGTTTGGACAAATCCTTGTGCTTTCCAACCGGAGAGATTTCTCAATGCTCATGCTGATGTTGATGTTAAAGGCCAACAATTTGAACTGATGCCTTTTGGGTCTGGCAGAAGATCGTGCCCTGGAGTTTCATTTGCACTCCAAGTCCTGCACTTGACCCTCGCACGACTCCTTCATGCATTTGAATTGTCAACGCCAGTGGATCAGCCGGTCGACATGACTGAGAGCTCGGGTTTAACCATTCCAAAAGCAACCCCATTAGAGGTCCTCTTGACTCCACGCCTGAACTCCAAGCTCTATGCTTTTTAA 1614 0.4802 MHACSSRPSTMDPALHLPAFFVFLSLIYVFYAMLGRKKIIKSSKSRDAPEPGGAWPIIGHLHLLGGGDQLLYRTLGAMADKYGPAFNIRLGSRRAFVVSSWEVAKECFTINDKALATRPTTVAAKHMGYNYAVFGFAPYSPFWREMRKIATLELLSNRRLEILKHVRTSEVDMGIRELYGLWVKNSSRPLLVELNRWLEDMTLNVIVRMVAGKRYFGAAAASDSSEARRCQKAISQFFRLIGIFVVSDALPFLWWLDLQGHERAMKTTAKELDSILEGWLEEHRQRRVSSLIKAEGEQDFIDVMLSLQEEGRLSGFQYDSETSIKSTCLALILGGSDTTAGTLTWAISLLLNNRHALKKAQEELDLCVGMERQVEESDVKNLVYLQAIIKETLRLYPAGPLLGPREALDDCTVAGYNVPAGTRLIVNIWKLQRDPSVWTNPCAFQPERFLNAHADVDVKGQQFELMPFGSGRRSCPGVSFALQVLHLTLARLLHAFELSTPVDQPVDMTESSGLTIPKATPLEVLLTPRLNSKLYAF* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0949 537 SUPERFAMILY Cytochrome P450 49 529 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0949 537 PRINTS E-class P450 group I signature 323 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0949 537 PRINTS E-class P450 group I signature 79 98 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0949 537 PRINTS E-class P450 group I signature 103 124 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0949 537 PRINTS E-class P450 group I signature 201 219 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0949 537 PRINTS E-class P450 group I signature 475 498 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0949 537 PRINTS E-class P450 group I signature 386 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0949 537 PRINTS E-class P450 group I signature 427 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0949 537 PRINTS E-class P450 group I signature 343 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0949 537 PRINTS E-class P450 group I signature 465 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0949 537 PANTHER CYTOCHROME P450 82C3-RELATED 25 535 - -
Vvi18g0949 537 CDD CYP82 83 529 - -
Vvi18g0949 537 Pfam Cytochrome P450 49 518 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0949 537 FunFam Cytochrome P450 82C4 38 527 - -
Vvi18g0949 537 PRINTS P450 superfamily signature 387 398 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0949 537 PRINTS P450 superfamily signature 334 351 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0949 537 PRINTS P450 superfamily signature 475 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0949 537 PRINTS P450 superfamily signature 466 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0949 537 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 468 477 IPR017972 GO:0005506|GO:0016705
Vvi18g0949 537 Gene3D Cytochrome P450 34 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0949 Vvi-Chr18 9699704 9701502 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0949 26 535 Cytochrome P450 AT4G31940 68.350 0.0 735
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0949 K23136 - vvi:100247206 1051.97