Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0933 ATGGCAGTAACCGATTTATTCCCCGGTGAAATCGCCGCGGAGCTCCTGAAAATGCTAATATCTATATCAAGAGAATCGTTTATGTGTAAATCGAGCGCAGAACAAATGGTAACGTATATACAACAAGTCCTCCCCATAATCCAAGAAATACAGTACTCGGGCGTGGAATTGTCGGAGTTGCGACAGTTTCAGATCGATCGCTTCGTGCATACTCTCCGCGAGGGCCAAGAGCTCGCCAAAAAAGTCCAGGCTTGCGGCAGATGGAACGTGTACAGGAAGGTGCAGTTGGCGAGAAAGATGGAGAAGCTAGAGAAGAACATCCTCAGGTTCTTGAATGGCCCCCTGCAGGCCCATATTCTGGCCGACGTCCACCACATGCGGTTCGAGTCAGCAGAGAGGTTCGACCGGCTGGAATTTTCGGCTCGGCGGCTCGAGGAGCAGCTTGGAGGCATGAAGATCGGGGTTGGTGGCGGAGGGTGGTTGGCGGAGGCAGTGAAGCGAGGGGGGGAGGAGGAGGAGAGTTGCGAAGGTTTGACAAGTATGGGGGTTGGGATGGCTTTAGGGAAGAAGAAGGTGAAGGAAATGCTTATTGATAGAGACGATCTGCGGGTTGTTGGGATTCATGGGATTGGTGGCAGTGGCAAAACTACTGTTGCCAAGGAGATTTGCAGAGATGGAGAAGTCCGAAGCTACTTTGATGACAGGATTCTGTTCCTGACTGTGTCGCAGTCCCCAAACGTGGAGCAGTTGAGGTCTCATATTTGGGAATATGTTGAAGGGAAGGACATGATTAATTCCCATGGTCCCATTCGACGATGGAAGTCACAATTTGAGAGGAGGATTGGAGTACGTACACTTGTGGTTCTGGATGATATCTGGTCACTCTCAGTGCTCGAGCTGCTGATTTCCAGAATACCTGGATGCAAAACCCTTGTTGTTTCACGGTTCAAATTCCCAACCATCCTCAACCTCACCTATGAGCTGGAATTGCTGAGAGAAGATGAAGCTATCTCCTTGTTCTGTCATGTTGCTTTTGGGCAGAAGTCCATACCTCTTTCTGCTAACGAGAATTTGGTCAAACAGGTTGTGCGCGAGTGTAAAGGGCTTCCTTTGGCTCTTAAAGTGATTGGAGCTTCACTTAGAGACCGGCCCCAAATGTTTTGGGCAAGTGCAGCAAGCAGGCTATCACAAGCAGAACCCATTTGTGAGTCCCACGAAACGAAATTGCTTGAACGAATGGCAGTTGGTATTGCTGACCTGCCAAAAATGGTTAGAGAATGTTTCTTGGACTTGGGAGCCTTTCCAGAGGATAAGAAGATTCCTCTTGATGTTCTAATCAACATCTGGGTTGAGATCCATGATCTTTTTCAGGATGATGCTTTTGCAGTTCTTTATGAGCTTGCAGAAAAGAATCTCCTTTCCCTGGTGAATGATGCAAGAGCTGGGGACATATATAGCAGCTATTTTGAGATCTCTGCTTCTCAGCATGATGTTTTGAGAGATCTTGCCCTTTACATGAGCAAGCGTGAGGGCATAAATGATCGAAGGCGTTTGCTTATGCCAAGGAGGGAAACAAGACTTCCAAAAGAATGGGAGAGGAATATGGACCAGCCATTTAATGCCCAAATTGTTTCAATTCATACAGGTGAAATGGGAGAAACAGACTGGTTCCAGATGGACTTGCCCAAGGCCGAGGTTCTTATCCTCAACTTCTCCTCAAGTGAATACTTCTTACCTCCCTTCATTGATCGGATGCCAAAGCTTCGAGCTTTAATATTAATCAATTACAGTACCTCAACGGCAATTCTGAATAATGTAGAAGTATTTTCCAAATTAACTAACTTGAGGAGCCTCTGGTTTGAGAAGATTTCTATCCCAGAGTTTCCCAAAGCTACTATCCCCATGAAAAGCTTGAAGAAAATATTTCTAGTTCTCTGCAAAATTGCCAACAGCCTTGATCAGTCTGTTGTAGACCTGCCCCAGATGTTCCCTTGCCTCGCAGAGCTCACAATGGATCATTGCGATGATTTATGTGAGCTTCCTTCAAGCATTTCAAGGATGCACTCGCTTGAATGCATGAGTATCACCAACTGCCACAGCCTCCAAGAACTGCCAGCCGACCTGGGAAAACTGAATTCCCTACAAATTCTTAGGATTTATGATTGCCCAAGTCTGAAGACGCTTCCTCCTGGCCTATGTGAATTGAAGTGTTTGAAGTATCTTGACATTTCTCAGTGTGTTGGTCTGGAATGCCTTCCTGAAGGAATCGGTGGATTGTTAAGGTTGGAAAAGATTGACATGAGGAAGTGCTCACGGATAAGAAATCTACCAAAATCTGCTGCCTCATTGCAATTGCTGCGTCATGTGATTTGTGATGAAGAGATTTCTTGGTTGTGGAAAGATGTGGAGACGGCTGTACCAGGTGTTCATGTGGAGTTTGCAAGGGAATGCTTTGATCTGGACTGGCTGGTGGAGTGA 2478 0.4645 MAVTDLFPGEIAAELLKMLISISRESFMCKSSAEQMVTYIQQVLPIIQEIQYSGVELSELRQFQIDRFVHTLREGQELAKKVQACGRWNVYRKVQLARKMEKLEKNILRFLNGPLQAHILADVHHMRFESAERFDRLEFSARRLEEQLGGMKIGVGGGGWLAEAVKRGGEEEESCEGLTSMGVGMALGKKKVKEMLIDRDDLRVVGIHGIGGSGKTTVAKEICRDGEVRSYFDDRILFLTVSQSPNVEQLRSHIWEYVEGKDMINSHGPIRRWKSQFERRIGVRTLVVLDDIWSLSVLELLISRIPGCKTLVVSRFKFPTILNLTYELELLREDEAISLFCHVAFGQKSIPLSANENLVKQVVRECKGLPLALKVIGASLRDRPQMFWASAASRLSQAEPICESHETKLLERMAVGIADLPKMVRECFLDLGAFPEDKKIPLDVLINIWVEIHDLFQDDAFAVLYELAEKNLLSLVNDARAGDIYSSYFEISASQHDVLRDLALYMSKREGINDRRRLLMPRRETRLPKEWERNMDQPFNAQIVSIHTGEMGETDWFQMDLPKAEVLILNFSSSEYFLPPFIDRMPKLRALILINYSTSTAILNNVEVFSKLTNLRSLWFEKISIPEFPKATIPMKSLKKIFLVLCKIANSLDQSVVDLPQMFPCLAELTMDHCDDLCELPSSISRMHSLECMSITNCHSLQELPADLGKLNSLQILRIYDCPSLKTLPPGLCELKCLKYLDISQCVGLECLPEGIGGLLRLEKIDMRKCSRIRNLPKSAASLQLLRHVICDEEISWLWKDVETAVPGVHVEFARECFDLDWLVE* 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0933 825 Gene3D - 331 415 IPR042197 -
Vvi18g0933 825 FunFam Probable disease resistance protein At5g66910 330 415 - -
Vvi18g0933 825 Pfam NB-ARC domain 190 401 IPR002182 GO:0043531
Vvi18g0933 825 Gene3D - 172 319 IPR027417 -
Vvi18g0933 825 Gene3D Ribonuclease Inhibitor 544 797 IPR032675 -
Vvi18g0933 825 ProSiteProfiles RPW8 domain profile. 1 149 IPR008808 -
Vvi18g0933 825 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 10 131 IPR008808 -
Vvi18g0933 825 Gene3D - 416 502 IPR036388 -
Vvi18g0933 825 SUPERFAMILY L domain-like 561 790 - -
Vvi18g0933 825 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 431 IPR027417 -
Vvi18g0933 825 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 2 823 IPR039203 GO:0050832
Vvi18g0933 825 PRINTS Disease resistance protein signature 366 380 - -
Vvi18g0933 825 PRINTS Disease resistance protein signature 733 749 - -
Vvi18g0933 825 PRINTS Disease resistance protein signature 204 219 - -
Vvi18g0933 825 PRINTS Disease resistance protein signature 279 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0933 Vvi-Chr18 9566632 9570052 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0933 201 787 WRKY Transcription Factor Family AT5G45050 23.089 1.76e-11 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0933 - - vvi:100260919 1632.85