Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0890 ATGGATTCAGCCAAACCTGAATTAGCACGCGAAGTTCTTCCGCTTCTCCGAATACACAAAGATGGCAGCGTCGAGAGGCTTCGAGGCACCGAGGTTGTTCCGGCAGGCACTGATCCTCAAACAGGAGTTTCATCCAAAGATGTGACTATCATCCCAGAAATAGACCTCTCCGCTCGCCTCTTCCTCCCAAAACTCACCAACCCTAACCAGAAACTCCCTCTCCTTGTCTACTTCCACGGTGGTGGTTTCTATCTCTCCACACCCTTCGCTCCAAACTACCATAACTACCTCAATTCACTGGTTTCCCAAGCAAACGTTGTTGCTGTTTCTGTCAACTACAGAAAAGCTCCTGAACACCCTATTCCTGCTGCGTACGAAGACTCCTGGGCAGCACTACAGTGGGTTGCTTCCCACTGTAATGGTAATGGGCCGGAGGCTTGGTTGAACGAGCATGCCAATTTCGAGAGGATCTTCCTTTCCGGAGAGAGCGCTGGCGCTAACATCGTTCATAACTTGGCAATGGCCGCCGGAAGAGGAGACGCCGAGTCTGGGCTTGGGGTGAGGCTTCTGGGGGTTGCTCTGGTCCACCCCTTCTTCTGGGGGTCGACCCCTATTGGGTCGGAGGCGGTGGATCCGGAGAGAAAGGCTTGGGTGGACTCGGTGTGGCCGTTCGTGTGTCCGTCGATGCCGGACAGTGACGACCCACGATTGAACCCGGTGGCGGAGGGTGCACCAAGCTTGGTGGGGTTGGGTTGTGGTAGGGCGCTGGTTTGTGTGGCTGAGAAGGACGTGTTGAGAGATAGGGGTTTGGTTTACTACTCGGCTTTGGCTGGGAGCGGATGGATGGGTGTGGCGGAGATGTTCGAGACGGATGGTGAGGACCATGCCTTTCACCTTCATGATTTGGGGTGTGAAAAGGCCAGAGATTTGATCCAACGCTTGGCTGCTTTCTTGAATAGGGACATGCTTCCTTGGATTTGA 981 0.5433 MDSAKPELAREVLPLLRIHKDGSVERLRGTEVVPAGTDPQTGVSSKDVTIIPEIDLSARLFLPKLTNPNQKLPLLVYFHGGGFYLSTPFAPNYHNYLNSLVSQANVVAVSVNYRKAPEHPIPAAYEDSWAALQWVASHCNGNGPEAWLNEHANFERIFLSGESAGANIVHNLAMAAGRGDAESGLGVRLLGVALVHPFFWGSTPIGSEAVDPERKAWVDSVWPFVCPSMPDSDDPRLNPVAEGAPSLVGLGCGRALVCVAEKDVLRDRGLVYYSALAGSGWMGVAEMFETDGEDHAFHLHDLGCEKARDLIQRLAAFLNRDMLPWI* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0890 326 Pfam alpha/beta hydrolase fold 75 298 IPR013094 GO:0016787
Vvi18g0890 326 Gene3D alpha/beta hydrolase 14 323 IPR029058 -
Vvi18g0890 326 SUPERFAMILY alpha/beta-Hydrolases 9 320 IPR029058 -
Vvi18g0890 326 PANTHER ARYLACETAMIDE DEACETYLASE 13 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0890 Vvi-Chr18 9077738 9078718 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0890 1 321 Carbohydrate Esterase AT3G48700 48.060 9.90e-106 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0890 - - vvi:100259070 660.988