Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0863 ATGGCCATTACAGTAGGCACAGGCTTTCTTGTTCAGCCCTCATCTTCTCTATCTTTGCTTGGAAGGAAATCATGTAGACCCACATTGGATGTAGCTTACAGGTTCTTGCCTGCTAGACCTGGACCTAGCCGCTTCAGTCATGGGACTGTGGTTCAGGCCCAACAACGGCCAACATGGCTTCCTGGACTTGATCCTCCACCTTACCTTAATGGAACTTTGGCTGGAGATTTTGGGTTCGACCCACTTGGACTGGGAGAGGACCCAGAAAATTTGAGATGGTATGTGCAGGCAGAACTGGTTCATGCTCGCTTTGCCATGGCTGGAGTTGCTGGAATTCTTGTGACAGATTTACTCCGAGTCACAGGAATCAGCAATTTACCAGTCTGGTATGAGGCGGGCGCTGTTAAATTTGAGTTTGCAAGCACGGAAGCTTTGTTCATAGTCCAACTAATTCTGATGGGATTTGTTGAAACCAAAAGGTATATGGATTTCACTAATCCTGGATCTCAGGCAAAGGAAGGATCTTTCTTTGGATTGGAAGCAGCACTAGAAGGCTTAGAACCCGGATACCCCGGTGGTCCTCTGCTAAATCCTCTTGGCCTGGCTAGGGATATCAAAAACGCGCATGACTGGAAGCTCAAGGAGATCAAGAATGGACGGCTGGCAATGGTAGCCATGCTGGGAGTTTTTGTGCAAGCTTCTGTAACTCATGCAGGCCCAATTGAGAACCTGGTGGAGCACCTCTCCAATCCATGGCACAAGACTATTATTCAGACAATTTCCTCGACTTCTTAA 795 0.478 MAITVGTGFLVQPSSSLSLLGRKSCRPTLDVAYRFLPARPGPSRFSHGTVVQAQQRPTWLPGLDPPPYLNGTLAGDFGFDPLGLGEDPENLRWYVQAELVHARFAMAGVAGILVTDLLRVTGISNLPVWYEAGAVKFEFASTEALFIVQLILMGFVETKRYMDFTNPGSQAKEGSFFGLEAALEGLEPGYPGGPLLNPLGLARDIKNAHDWKLKEIKNGRLAMVAMLGVFVQASVTHAGPIENLVEHLSNPWHKTIIQTISSTS* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0863 264 FunFam Chlorophyll a-b binding protein, chloroplastic 57 264 - -
Vvi18g0863 264 Gene3D Chlorophyll a/b binding protein domain 57 264 - -
Vvi18g0863 264 Pfam Chlorophyll A-B binding protein 65 233 IPR022796 -
Vvi18g0863 264 SUPERFAMILY Chlorophyll a-b binding protein 50 261 - -
Vvi18g0863 264 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 46 260 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0863 Vvi-Chr18 8871603 8873670 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0863 50 261 Chloroplast and Mitochondria Gene Families AT3G61470 45.540 3.12e-59 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0863 K08911 - vvi:100255844 509.99