Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0853 ATGGGGAGTAATTTGAACTTCAAAAACTTCGGAGGCAGCCAGCAGGGCGATGGCAGCGGTAGGCCTCCAGGAAACATGCCCTTGGTGAGACAAGGGTCGATCTACTCGCTGACCTTTGACGAGTTCCAGAGCACCATGGGAGGCATAGGAAAGGACTTTGGGTCGATGAACATGGATGAATTGTTGAAGAACATTTGGAGTGCTGAAGAGGCCCAAACTATGGCTGCGGTAGCAGCAGCAACGGCGCCACCGATTAGTGTGCAAGAAGGGGTTGTGGCTGGTGGATATTTGCAGAGACAGGGATCTTTAACGTTACCGCGGACATTGAGTCAGAAGACGGTAGACGAAGTCTGGAAGGATATGTCAAAAGAGTACGGTGGTGGAGCTAAGGATGGAAGTGGAGCTGGAGGATCGAATTTGCCTCAAAGGCAGCCGACTCTGGGAGAGATGACTCTTGAGGAGTTTCTGGTGAGGGCAGGTGTGGTGAGGGAGGATACTCAATTGGCAGGAAAGCCTAATAATGGAGGGTTTTTTGGTGATTTAGCGAATTTGGGTAACGGCAATGGTTTAGGCATTGCATTTCAACAAATGGGTCAAAACACAGGATTGATGGGAAACCCTCGGATTACTGAAAGTAATAATCAAATTTCCACGCAATCACCTATTTTGCCATTGAATGTTAATGGGGTCAGATCTACCCAGCAGCAGCCACAACAGCTGCAACAACTGCAACAGCTGCAACAACGGTCATCACAGCAGCAACTCTTTCCAAAGCAGGCTCCGGTAACCTATACCACTCCGGTTTCTGTACAAAGTAATAGCCAGCTGTGTAACCCAGGAATTAGAAATGGGATGGTTGGAATTTCGGATTCCGGTATAAATGGTAATCTGGTTCAGAGTAGTGTGCTTCATGGTGGCGGGATGGGAATGGTTGGTTTGGGAGCTGGGGGTGCTACCATTGCAAGTGGATCTCCTGCCAATCAGTCATCAGATGGGATTGGGAAGAGTAATGGGGATACATCTTCCGTTTCACCTGTTCCCTATGCATTTAATGGAGGTATAAGAGGAAGGAAATGCAGTGGGGCTGTAGAGAAGGTTATTGAAAGGAGACAGAGGAGAATGATAAAGAATAGAGAATCAGCTGCTAGATCACGGGCTCGTAAACAGGCTTATACTATGGAATTGGAAGCAGAGGTTGCAAAATTGAAAGAGAAGAATGAGGAATTGGAGAAGAAACAGGCTGAAATGATGGAAATGCAGAAAAATCAGGTTATGGAGATGATGAATCTGCAACGAGAAGTAAAGAAACGTTGCTTGAGACGCACACTGACTGGCCCCTGGTGA 1344 0.4732 MGSNLNFKNFGGSQQGDGSGRPPGNMPLVRQGSIYSLTFDEFQSTMGGIGKDFGSMNMDELLKNIWSAEEAQTMAAVAAATAPPISVQEGVVAGGYLQRQGSLTLPRTLSQKTVDEVWKDMSKEYGGGAKDGSGAGGSNLPQRQPTLGEMTLEEFLVRAGVVREDTQLAGKPNNGGFFGDLANLGNGNGLGIAFQQMGQNTGLMGNPRITESNNQISTQSPILPLNVNGVRSTQQQPQQLQQLQQLQQRSSQQQLFPKQAPVTYTTPVSVQSNSQLCNPGIRNGMVGISDSGINGNLVQSSVLHGGGMGMVGLGAGGATIASGSPANQSSDGIGKSNGDTSSVSPVPYAFNGGIRGRKCSGAVEKVIERRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKEKNEELEKKQAEMMEMQKNQVMEMMNLQREVKKRCLRRTLTGPW* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0853 447 Gene3D - 367 424 - -
Vvi18g0853 447 MobiDBLite consensus disorder prediction 124 144 - -
Vvi18g0853 447 MobiDBLite consensus disorder prediction 1 20 - -
Vvi18g0853 447 MobiDBLite consensus disorder prediction 1 27 - -
Vvi18g0853 447 Pfam bZIP transcription factor 369 421 IPR004827 GO:0003700|GO:0006355
Vvi18g0853 447 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 367 418 IPR004827 GO:0003700|GO:0006355
Vvi18g0853 447 SUPERFAMILY Leucine zipper domain 369 419 IPR046347 GO:0003700|GO:0006355
Vvi18g0853 447 Coils Coil 388 422 - -
Vvi18g0853 447 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 5 367 424 - -
Vvi18g0853 447 CDD bZIP_plant_BZIP46 369 400 - -
Vvi18g0853 447 SMART brlzneu 365 429 IPR004827 GO:0003700|GO:0006355
Vvi18g0853 447 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 29 447 IPR043452 GO:0003700|GO:0045893
Vvi18g0853 447 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 372 387 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0853 Vvi-Chr18 8762147 8769260 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0853 1 447 bZIP Transcription Factor Family AT4G34000 45.248 1.27e-107 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vvi18g0853 bZIP_1 4e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0853 K14432 - vvi:100232889 763.451