Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0843 ATGGCTACCCATATTCCTTTGTATGTGTGGCTCCTCCTTATCCCTATCTCACACCTCGTTTCCACGTTGGCACAGTCGGACACTTACATTGTCCACATGGACCTATCAGCCATGCCTAAAGCTTTCTCCGGCCATCATAGCTGGTACATGGCTACCCTTGCGTCTGTGTCAGATAATACCGCTGCCACTGCTAACCCTTACTCCTCTTCCTACTCTTCTAAACTTATATACAGCTATACTAATGTAATCCATGGTTTTAGTGCAATCCTTTCCCCTTCGGAGCTTGAGGCCCTGAAAAGCTTCCCGGGCTATATTTCTTCATTTCCAGATCTTCCTGTTAAAGCTGATACAACTCATTCTGCTAAATTTCTTGGCCTGAATTCCAACTCCGGAGCGTGGCCCATGTCAAACTATGGCAAAGATGTCATAATCGGGTTGGTGGACACTGGAATTTGGCCAGAGAGTGAAAGCTTTAACGATGATGGAATGACCGAAATTCCATCTAGATGGAAAGGAGCATGCGAGAGCGGCACCCAGTTCAATTCTTCAATGTGCAACAAGAAGCTGATTGGAGCTCGGTTCTTCAACAAAGGTCTAATTGCCAAACATCCCAATGTGTCCATCTCAATGAATTCAACCCGTGACACCGATGGCCATGGGACCCATACGTCAACAACAGCAGCTGGAAATTATGTAGAGGGTGCGTCGTACTTCGGCTATGGCTCAGGAACTGCTAGCGGCATGGCTCCCCGAGCTCGTGTGGCCATGTACAAGGCCCTGTGGGACGTGGGTGCCGTCGCATCTGATATTATTGCTGCAATTGATCAGGCAATCATAGATGGGGTTGACGTCATGTCCTTGTCACTGGGCTTAGACGGGGTTCTGTTGTATGAAGATCCCATTGCCATAGCCACATTTGCAGCCTTGGAGAAGGATATCTTCGTAGCTACGTCAGCAGGAAACGAGGGGCCTTTTCTTGGAACCTTACACAACGGAATTCCTTGGGTTCTAACTGTTGCTGCCAGCACCATGGACCGCCAATTCAGCGGGATTGTGACCCTCGGGAATGGAGTTTCAGTCATCGGTTCCTCTCTCTATCCTGCAAATTCATCTTTCAGCCAAATCCCAATTGTTTTCATGGGTTCATGCGAGGATTTGACGGAATTGAAGAAAGTTGGCTTTAAGATTGTTGTGTGCCAGGACCAGAATGACTCCTTAAGCATCCAAGTTGATAATGCCAACACTGCGAGAGTGGCGGGAGGAGTCTTCATAACAGATTACCCCGACATAGAATTCTTCATGCAAAGCTCTTTTCCAGCCACTTTTGTCAACCCTGAAAACGGAAAAGTTGTTATGGACTACATAAAGACTAGCTCTGAGCCAAAAGCAAGTATAGAATTTTCAAAAACAATTCTTGGTGCCAAACGCGCACCAAGAATGGCTACCTACAGCTCCAGAGGGCCGTCTCCAAGCTGCCCAGTGGTCTTGAAGCCCGACCTTACTGCCCCCGGCGCATTAATCTTGGCGTCATGGCCAAAAATTAACCCAGTGGCTGATGTGAATTCGCGGTTACTTTATAGTGAATTCAATCTATTGTCGGGGACATCTATGGCGTGCCCCCATGCAGCAGGAGTAGGGGCACTTCTGAAGGGTGCACACCCTGAATGGAGCCCCGCAGCCATCCGGTCAGCCATGATGACCACTTCTGATTCACTGGATAATACACTCAACCCCATCAAAGGCATTGGCGACGATAACCAACCAGCCAGTCCCCTAGCCATGGGATCTGGCCATATCAATCCCAACAAGGCTCTTGACCCAGGATTCATCTATGACGTGAATCTTGAAGACCATATAAATCTCCTCTGTGCATTGAATTACTCCACCAAGCAAATCCAAATTATCACAAGGTCATCTTCCTACACTTGCTCCGACCCCTCCTTGGATCTCAACTACCCGTCTTTCATTGCCTCCTTTGATGCAAATGATTCCAGATCAGATTCTAAAACCGTGCAAGAATTTAGAAGAACAGTGACTAACGTCGGGGAAGCAATGTCGACTTACAACGCTAAGCTGACAGGCATGGACGGATTTCAGGTGAGCGTGGTGCCTGACAAATTGGTTTTCAAAGACAAGTACCAGAAGCTAAGCTACAAGCTGAGGATAGAAGGCCCCAGTCTGATGAAAGAGACGGTAGCCTTCGGTTCACTGAGCTGGGTGGATGTTGAAGCTAAACATGTGGTCAGAAGCCCCATAGTGGCCACAAGGCTGAGCTTAGTAGCTCTGTGA 2289 0.4806 MATHIPLYVWLLLIPISHLVSTLAQSDTYIVHMDLSAMPKAFSGHHSWYMATLASVSDNTAATANPYSSSYSSKLIYSYTNVIHGFSAILSPSELEALKSFPGYISSFPDLPVKADTTHSAKFLGLNSNSGAWPMSNYGKDVIIGLVDTGIWPESESFNDDGMTEIPSRWKGACESGTQFNSSMCNKKLIGARFFNKGLIAKHPNVSISMNSTRDTDGHGTHTSTTAAGNYVEGASYFGYGSGTASGMAPRARVAMYKALWDVGAVASDIIAAIDQAIIDGVDVMSLSLGLDGVLLYEDPIAIATFAALEKDIFVATSAGNEGPFLGTLHNGIPWVLTVAASTMDRQFSGIVTLGNGVSVIGSSLYPANSSFSQIPIVFMGSCEDLTELKKVGFKIVVCQDQNDSLSIQVDNANTARVAGGVFITDYPDIEFFMQSSFPATFVNPENGKVVMDYIKTSSEPKASIEFSKTILGAKRAPRMATYSSRGPSPSCPVVLKPDLTAPGALILASWPKINPVADVNSRLLYSEFNLLSGTSMACPHAAGVGALLKGAHPEWSPAAIRSAMMTTSDSLDNTLNPIKGIGDDNQPASPLAMGSGHINPNKALDPGFIYDVNLEDHINLLCALNYSTKQIQIITRSSSYTCSDPSLDLNYPSFIASFDANDSRSDSKTVQEFRRTVTNVGEAMSTYNAKLTGMDGFQVSVVPDKLVFKDKYQKLSYKLRIEGPSLMKETVAFGSLSWVDVEAKHVVRSPIVATRLSLVAL* 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0843 762 PRINTS Subtilisin serine protease family (S8) signature 139 158 IPR015500 -
Vvi18g0843 762 PRINTS Subtilisin serine protease family (S8) signature 215 228 IPR015500 -
Vvi18g0843 762 PRINTS Subtilisin serine protease family (S8) signature 533 549 IPR015500 -
Vvi18g0843 762 Gene3D Peptidase S8/S53 domain 141 617 IPR036852 GO:0004252|GO:0006508
Vvi18g0843 762 Pfam Peptidase inhibitor I9 28 115 IPR010259 -
Vvi18g0843 762 CDD Peptidases_S8_3 113 570 IPR034197 -
Vvi18g0843 762 CDD PA_subtilisin_like 352 465 - -
Vvi18g0843 762 Gene3D - 345 472 - -
Vvi18g0843 762 Pfam Fibronectin type-III domain 649 753 IPR041469 -
Vvi18g0843 762 SUPERFAMILY Subtilisin-like 116 608 IPR036852 GO:0004252|GO:0006508
Vvi18g0843 762 ProSitePatterns Serine proteases, subtilase family, serine active site. 534 544 IPR023828 -
Vvi18g0843 762 Gene3D - 622 757 - -
Vvi18g0843 762 FunFam Subtilisin-like protease SBT1.5 141 356 - -
Vvi18g0843 762 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 115 IPR037045 -
Vvi18g0843 762 FunFam Subtilisin-like protease SBT1.9 17 116 - -
Vvi18g0843 762 Pfam Subtilase family 139 583 IPR000209 GO:0006508|GO:0008236
Vvi18g0843 762 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 29 753 IPR045051 -
Vvi18g0843 762 ProSiteProfiles Serine proteases, subtilase domain profile. 118 605 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0843 Vvi-Chr18 8674996 8677284 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0843 11 757 Subtilisin-like Serine Gene Family AT5G67090 47.266 0.0 665
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0843 - - vvi:109121565 1459.89