Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0842 ATGAGGTGTGAATCGTTTGATAAGGTGGTTCATCGTCTCCACTTGATCCTCCTGACATGGATTTTGTTGACTATTCAAGCTAGATCAATGTCAGGAGAGAGGTCTACGTATATCATCCACATGGACAAGTCTGTGATGCCCAAGGTTTTCGCAACCCATCACCACTGGTACTCCTCCATCCTTCATGCTATAAAGACTGACACTCCCACAACATCCGCCGGCCTTCAGTCCACTGCCCGGCTTATCTATACTTATGATCACGCTCTCCATGGCTTCAGCGCTCTTCTATCTTCACAAGAGTTGGAGAGTTTACGTGAATCCCCAGGGTTCGTTTCAGCTTACCGTGACAGGGCAGTCACACTTGACACCACCCACACTTTTGAATTTCTCAAACTCAACCCTGTCACTGGTCTATGGCCTGCATCGGACTATGGCGAAGACGTCATCGTTGGCGTTATTGACAGCGGTGTCTGGCCGGAGAGCCCCAGCTTCAAAGATGACGGTATGACCCAAATTCCTGCAAGGTGGAAGGGTACATGTGAGGAAGGTGAAGACTTCAATTCTTCCATGTGTAACCGAAAGCTCATTGGAGCTAGATCATTCATTAAGGGTCTGATAGCGGCAAATCCTGGCATTCACGTAACAATGAACTCGCCTAGGGACTCATTTGGGCATGGGACTCATACTTCGTCCACCGTTGCTGGGAATTATGTGGAAGGTGCATCCTACTTTGGTTATGCCACGGGAACTGCAAGAGGGGTTGCGCCCAGAGCCAGGGTGGCCATGTATAAGGTCGCCGGCGAAGAAGGGCTCACTTCTGATGTAATCGCTGGTATTGATCAAGCCATCGCTGATGGCGTTGATGTGATTTCTATTTCCATGGGATTTGATTATGTGCCATTGTATGAAGATCCAATAGCTATAGCTTCATTTGCTGCTATGGAGAAGGGCGTATTAGTTTCATGTTCTGCAGGGAATGCTGGCCCACTTCCTCTTGGGACATTACATAATGGAATACCATGGATCTTGACAGTCGCAGCCGGTACTATAGACCGTTCATTCACTGGAACTTTGACTCTTGGAAATGGGTTAACCATTACTGGATGGACCATGTTTCCTGCAAGTGCTGTTGTTCAAAACCTTCCTCTTATTTACGACAAGACTTTATCTGCGTGCAATTCATCAGAGTTGTTATCTGGCGCACCTTATGGCATCATCATATGCCACAACACCGGATATATCTATGGTCAATTGGGTGCGATCTCTGAGTCAGAAGTTGAAGCTGCTATATTTATTTCCGATGATCCCAAATTATTCGAGTTGGGCGGTCTAGACTGGCCTGGCGTGGTGATTAGCCCGAAAGATGCGCCGGCTCTGATTGATTATGCAAAAACTGGTAATAAACCAAGAGCCACCATGACATTCCAACAGACCATTGTGAATACAAAACCTGCACCTGCAGTTGCTTTTTACACGTCAAGAGGTCCTTCACCCAGCTGTCCTACCATCTTGAAGCCGGACGTAATGGCACCTGGGTCACTGGTTTTGGCTGCTTGGGTTCCAAATCGTGAGACAGCAAGAATTGGGACAGGTTTGTCCTTGTCCAGTGACTACACCATGGTCTCCGGCACATCCATGGCTTGTCCGCATGCGTCTGGTGTGGCTGCGCTCCTCAGAGGTGCACACCCGGAGTGGAGTGTAGCAGCTATCCGGTCAGCCATTGTGACCACAGCAAACCCATATGATAACACTTTTAATCATATTCGGGACAACGGTTTGAATTTCACAATTGCTTCTCCTCTGGCAATGGGAGCTGGCCAAATTGATCCAAACGGAGCACTTGACCCAGGTCTAGTATACGATGCAACCCCACAAGACTACGTCAACCTCCTCTGCTCCATGAACTTCACCAAAAAGCAAATCTTAACCATTACTAGATCAAACACTTACACTTGCCCCAAAACATCTCCAGACTTGAATTACCCATCATTCATTGCTCTGTACAGCCAAAATGACAACAAATCAACAACAGTGGTTCAGAAATTTCAAAGAACTGTAACGAATGTAGGAGATGGCACAGCAACTTATCACGCTACAGTGATAGCTCCTAGAGGCTCCAAGGTCACAGTCTCACCGACGACTCTAGTCTTTGAGAAGAAGTATGAGAAGCAGAGTTACACTATGAGTATAAAGTATAAGAGCGACAAGGACGGGAAGATTTCCTTTGGTTGGTTGACATGGATCGAAGACGATGGAGAACACACAGTGAGGAGCCCGATAGTGGTTTCACCGCTGGTGGTGAACCACCGGTAA 2313 0.4738 MRCESFDKVVHRLHLILLTWILLTIQARSMSGERSTYIIHMDKSVMPKVFATHHHWYSSILHAIKTDTPTTSAGLQSTARLIYTYDHALHGFSALLSSQELESLRESPGFVSAYRDRAVTLDTTHTFEFLKLNPVTGLWPASDYGEDVIVGVIDSGVWPESPSFKDDGMTQIPARWKGTCEEGEDFNSSMCNRKLIGARSFIKGLIAANPGIHVTMNSPRDSFGHGTHTSSTVAGNYVEGASYFGYATGTARGVAPRARVAMYKVAGEEGLTSDVIAGIDQAIADGVDVISISMGFDYVPLYEDPIAIASFAAMEKGVLVSCSAGNAGPLPLGTLHNGIPWILTVAAGTIDRSFTGTLTLGNGLTITGWTMFPASAVVQNLPLIYDKTLSACNSSELLSGAPYGIIICHNTGYIYGQLGAISESEVEAAIFISDDPKLFELGGLDWPGVVISPKDAPALIDYAKTGNKPRATMTFQQTIVNTKPAPAVAFYTSRGPSPSCPTILKPDVMAPGSLVLAAWVPNRETARIGTGLSLSSDYTMVSGTSMACPHASGVAALLRGAHPEWSVAAIRSAIVTTANPYDNTFNHIRDNGLNFTIASPLAMGAGQIDPNGALDPGLVYDATPQDYVNLLCSMNFTKKQILTITRSNTYTCPKTSPDLNYPSFIALYSQNDNKSTTVVQKFQRTVTNVGDGTATYHATVIAPRGSKVTVSPTTLVFEKKYEKQSYTMSIKYKSDKDGKISFGWLTWIEDDGEHTVRSPIVVSPLVVNHR* 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0842 770 Gene3D - 631 765 - -
Vvi18g0842 770 Pfam Peptidase inhibitor I9 36 121 IPR010259 -
Vvi18g0842 770 ProSitePatterns Serine proteases, subtilase family, serine active site. 543 553 IPR023828 -
Vvi18g0842 770 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 23 122 IPR037045 -
Vvi18g0842 770 Gene3D Peptidase S8/S53 domain 147 627 IPR036852 GO:0004252|GO:0006508
Vvi18g0842 770 FunFam Subtilisin-like protease SBT1.9 25 122 - -
Vvi18g0842 770 PRINTS Subtilisin serine protease family (S8) signature 542 558 IPR015500 -
Vvi18g0842 770 PRINTS Subtilisin serine protease family (S8) signature 221 234 IPR015500 -
Vvi18g0842 770 PRINTS Subtilisin serine protease family (S8) signature 145 164 IPR015500 -
Vvi18g0842 770 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 37 762 IPR045051 -
Vvi18g0842 770 Gene3D - 351 480 - -
Vvi18g0842 770 ProSiteProfiles Serine proteases, subtilase domain profile. 126 614 - -
Vvi18g0842 770 SUPERFAMILY Subtilisin-like 122 618 IPR036852 GO:0004252|GO:0006508
Vvi18g0842 770 Pfam Fibronectin type-III domain 658 762 IPR041469 -
Vvi18g0842 770 Pfam Subtilase family 145 584 IPR000209 GO:0006508|GO:0008236
Vvi18g0842 770 FunFam Subtilisin-like protease SBT1.5 147 360 - -
Vvi18g0842 770 CDD Peptidases_S8_3 119 579 IPR034197 -
Vvi18g0842 770 CDD PA_subtilisin_like 357 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0842 Vvi-Chr18 8669776 8672088 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0842 30 766 Subtilisin-like Serine Gene Family AT5G67090 43.008 0.0 574
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0842 - - vvi:100259061 1525.38