Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0840 ATGAGCAGGGTGCGGAGTTCCCGCAGTCTCTTTTCACATCATGCAGTACTGTCTTGGCTACTGCTCTTACTACTAGGGATCAACAATGCGATGTCAGAACTTGAAGAACGCCAGACATACATCATTCATATGGACCATTCCTACAAGCCTGATTCCTTCTCAACTCATGAATCATGGCACCTTTCTACTCTAAAATCAGTGTCAACATCTCCAGTCAACCACAAAGAAATGTTGCTCTACTCCTATAGTCATGTGATGCAAGGTTTCAGTGCCAGACTCACACCTTCTGAACTATCGCAATTGGAGAAGTCTCCAGCTCATCGTGCCACATATCGGGAGACGTTTGGAAAGCTCTTCACCACCCACACCACTAAGTTCCTTGGGCTAAAACCCAACTCTGGCATATGGCCTGCAGCATCATATGGTGACGGTGTGATCATTGGAATAATTGACACTGGAATTTGGCCAGAAAGCAGGAGCTTTAGCGACAAAGGGATGTCACCAGTGCCAGAGAGATGGAAGGGCCAGTGTGAGTATGGAACGGCATTTTCCCAATCTTGTTGCAACAGGAAGCTCGTTGGTGCTCGATCTTTTAGCAAAGGCCTCATAGCAGCAGGCCGAAATATCTCCACGGAGCTTGACTTTGACTCAGCACGAGACAATGTTGGTCATGGCACCCACACCTCATCCACGGCTGCAGGTAACTACGTACTTGGTGCAAGTCATTTTGGATATGCTAGGGGTAGCGCCAGAGGGGTGGCACCACGAGCGCATCTTGCCATGTACAAGGTCCTCTGGGCAACAGATACATATGAGAGTGCAGCTACTGATGTGCTTGCTGGCATGGACCAAGCAATAGTTGATGGGGTTGATATCATGTCATTGTCTCTTGGCTTTGACCAAACACCTTATTTCAGCGATGTCATCGCCATTGCTTCTCTTTCCGCAATTGAGCAAGGAATTTTTGTTGTCTGTGCTACTGGGAATGATGGTGGGACAAGTAGTACACACAACGGAGCACCTTGGATCATGACAGTAGGAGCTGGCACCATTGATCGGAGCTTCGTGGCAACAATGACTCTTGGAAATGGCTTAGTAGTGGAAGGGACATCATACTTCCCACAGAGCATTTACATTACTAATGCACCTCTGTACTACGGAAGAGGGGATGCAAACAAAGAGACATGCAAGCTTTCAGCTTTGGATCCAAATGAGGTAGCTGGAAAGGTAGTCCTCTGTGACAGTACAGAGACTGATGTTTATACACAGATACAGGAGGTTGAAAGTGCAGGTGCATATGCGGGCATCTTCATTACCGATAATCTGTTGTTGGATCCAGATGAGTACTCCATTCCTAGCCTGGTTCTGCCAACTAATTCTGGGACTTCAGTCCTGGAGTACGTAACAGGAATGAGTAATGCAACAGTGAAGGCCCTAAGGTTCGTGTCAACGAAGTTGGGTACAAAGCCAGCACCTCAAGTGGCTTATTTCTCTTCTAGAGGACCCGACCCAATTAGTCCGGGTGTTCTGAAACCAGATATTCTTGCTCCTGGAGTGGATGTATTGGCAGCAGTTGCACCCAACGTGCCATTCATGCAAATTGGTGACTATGATTTGGTGACAGATTATGCACTATTCTCCGGCACATCAATGGCAGCACCTCATGTTGCTGGAGTTGCAGCATTGTTGAAGGCTGTCCACCGTGATTGGAGCCCAGCAGCCATCCGATCAGCTATCATGACTACCGCAAATACTATAGACAATATTGGCTCTGCTTTTAGAGACCAATGGACAGGACTTCCCGCTTCTCCTCTAGATTTTGGCGCTGGCCATATCAATCCCAACAAAGCCATGGATCCTGGACTCATCTTCGACATGGATTTGCAAGATTATGTTGAGTTCTTATGCGGCCTTGGCTACACTAGGAAGCAGATGAGTGCCATCCTCAGACGCAACCAATGGAACTGCAGTGGGAAACCTAATGACCTCAATTATCCTTCATTTGTGGCCATATTTACTAAAGGAGCAGAGTCTCCAAAAGTAAGGAACTTCAGCAGGGTACTGACAAACGTGGGGAATGATACAGCAACTTACCAGGCAGTTGTAGAGGTTCCTACTGGAATGAGAATCAAAACAGAGCCCAGTATTCTCACATTCACTAGCAAATACCAGAAGCGAGGTTTCTTCGTGACCGTAGAGATTGATGCAGATGCTCCCAGTGTCACCTATGGTTATCTGAAATGGATTGATCAACACAAGCACACTGTATCAAGCCCCATAGTGGCCATCTATAATAAGTGA 2301 0.4702 MSRVRSSRSLFSHHAVLSWLLLLLLGINNAMSELEERQTYIIHMDHSYKPDSFSTHESWHLSTLKSVSTSPVNHKEMLLYSYSHVMQGFSARLTPSELSQLEKSPAHRATYRETFGKLFTTHTTKFLGLKPNSGIWPAASYGDGVIIGIIDTGIWPESRSFSDKGMSPVPERWKGQCEYGTAFSQSCCNRKLVGARSFSKGLIAAGRNISTELDFDSARDNVGHGTHTSSTAAGNYVLGASHFGYARGSARGVAPRAHLAMYKVLWATDTYESAATDVLAGMDQAIVDGVDIMSLSLGFDQTPYFSDVIAIASLSAIEQGIFVVCATGNDGGTSSTHNGAPWIMTVGAGTIDRSFVATMTLGNGLVVEGTSYFPQSIYITNAPLYYGRGDANKETCKLSALDPNEVAGKVVLCDSTETDVYTQIQEVESAGAYAGIFITDNLLLDPDEYSIPSLVLPTNSGTSVLEYVTGMSNATVKALRFVSTKLGTKPAPQVAYFSSRGPDPISPGVLKPDILAPGVDVLAAVAPNVPFMQIGDYDLVTDYALFSGTSMAAPHVAGVAALLKAVHRDWSPAAIRSAIMTTANTIDNIGSAFRDQWTGLPASPLDFGAGHINPNKAMDPGLIFDMDLQDYVEFLCGLGYTRKQMSAILRRNQWNCSGKPNDLNYPSFVAIFTKGAESPKVRNFSRVLTNVGNDTATYQAVVEVPTGMRIKTEPSILTFTSKYQKRGFFVTVEIDADAPSVTYGYLKWIDQHKHTVSSPIVAIYNK* 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0840 766 SUPERFAMILY Subtilisin-like 118 622 IPR036852 GO:0004252|GO:0006508
Vvi18g0840 766 FunFam Subtilisin-like protease SBT3 352 486 - -
Vvi18g0840 766 Pfam Subtilase family 142 593 IPR000209 GO:0006508|GO:0008236
Vvi18g0840 766 FunFam Subtilisin-like protease SBT4.1 635 764 - -
Vvi18g0840 766 CDD Peptidases_S8_3 117 584 IPR034197 -
Vvi18g0840 766 Gene3D - 635 764 - -
Vvi18g0840 766 CDD PA_subtilisin_like 358 477 - -
Vvi18g0840 766 Gene3D - 352 487 - -
Vvi18g0840 766 ProSiteProfiles Serine proteases, subtilase domain profile. 121 618 - -
Vvi18g0840 766 FunFam Subtilisin-like protease SBT1.5 144 362 - -
Vvi18g0840 766 Pfam Fibronectin type-III domain 662 761 IPR041469 -
Vvi18g0840 766 Pfam PA domain 393 460 IPR003137 -
Vvi18g0840 766 Pfam Peptidase inhibitor I9 39 106 IPR010259 -
Vvi18g0840 766 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 27 119 IPR037045 -
Vvi18g0840 766 Gene3D Peptidase S8/S53 domain 144 631 IPR036852 GO:0004252|GO:0006508
Vvi18g0840 766 PRINTS Subtilisin serine protease family (S8) signature 547 563 IPR015500 -
Vvi18g0840 766 PRINTS Subtilisin serine protease family (S8) signature 142 161 IPR015500 -
Vvi18g0840 766 PRINTS Subtilisin serine protease family (S8) signature 220 233 IPR015500 -
Vvi18g0840 766 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 40 761 IPR045051 -
Vvi18g0840 766 ProSitePatterns Serine proteases, subtilase family, serine active site. 548 558 IPR023828 -
Vvi18g0840 766 FunFam Subtilisin-like protease SBT1.9 28 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0840 Vvi-Chr18 8641104 8643404 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0840 39 766 Subtilisin-like Serine Gene Family AT3G14240 41.974 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0840 - - vvi:100248833 1477.61