Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0831 ATGGCAACTCCGACTGTTCGGCTCATCTCAGAATGCTTTATCAAACCAAAGTTCACTTCAGAAGAGACCAACGAGCCCTGTTACCTGACACCATGGGACCTTGCCATGCTCTCCGTCAATTATATCCAAAAGGGCCTTCTCTTTAGCAAACCACCTGATGTGGATGATCCACAAAACTTCATGGCAACTCTCTTGGACAAGCTCAAGGATTCTCTCGCTCTCACACTCGACCATTTCTACCCACTTGCAGGCCGCCTTGCAACAAAGAAGGAGGACAGTTCACCCTCTTACGTGGTCTTTGTAGATTGTAACAACAGTCCCGGATTGAAATTCATCCACGCAGCTGCAGACATGACAATATCTGACATCCTTTCACCAATTTATGTACCCCAAGTTATCCAATCATTCTTTGATCATGATAGGGTGATTAACCACGATGGTCGCACCTTGTCTTTGCTATCAATTCAAATCACAGAGCTTGTGGACGGCATCTTCATTGGATGTTCCATAAATCACAGCATGGTTGATGGAACCTCTTTCTGGCATTTCTTCAATGCATGGTCTGAGGTATTCACTGCACAGGGGAAGAATAGTTCCATAACACTGTCACGCCCACCCATCCTCAAGCGCTGGTTTCCTGATGGCTATGGTCCAATTATCAACCTTCCTTTCACTCACCATGATGAGTTCATCAGCAGATTTGAAGCACCCGTACTCAGAGAGAGAATTTTCCACTTCTCATCAGAATCAATAGCAAAGCTCAAAGCAAAGGCAAATGCACAGTGCAACAGCAACAAAATCTCCTCTTTCCAGGCATTGTCCGCACTTGTCTGGAGGTCCATAACACGAGCGCGCTGTTTCCCACATGAGCAGGTAACCAGTTGCAGGCTGGCCACCGGTAACAGAACAAGATTGGACCCGCCCTTGCCGGAGAACTACTTTGGGAACTCAATTCAAACGGTGAGAGGCATTGCCACTGCTGGCTGTGGTCGGTCACACTGA 1002 0.4721 MATPTVRLISECFIKPKFTSEETNEPCYLTPWDLAMLSVNYIQKGLLFSKPPDVDDPQNFMATLLDKLKDSLALTLDHFYPLAGRLATKKEDSSPSYVVFVDCNNSPGLKFIHAAADMTISDILSPIYVPQVIQSFFDHDRVINHDGRTLSLLSIQITELVDGIFIGCSINHSMVDGTSFWHFFNAWSEVFTAQGKNSSITLSRPPILKRWFPDGYGPIINLPFTHHDEFISRFEAPVLRERIFHFSSESIAKLKAKANAQCNSNKISSFQALSALVWRSITRARCFPHEQVTSCRLATGNRTRLDPPLPENYFGNSIQTVRGIATAGCGRSH* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0831 333 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 8 328 - -
Vvi18g0831 333 Gene3D - 227 330 IPR023213 -
Vvi18g0831 333 Gene3D - 1 218 IPR023213 -
Vvi18g0831 333 Pfam Transferase family 7 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0831 Vvi-Chr18 8563884 8564935 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0831 68 328 Monolignol Biosynthesis Gene Families AT5G48930 31.636 1.08e-28 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0831 - - vvi:100852809 672.159