Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0828 ATGGCAACTCTCTTGGACAGGCTCAAGGATTCTCTCGCTCTCACACTCGACCATTTCTACCCACTTGCAGGCCGCCTTGCAACAAAGAAGGAGGACAGTTCACCCTCTTACGTGGTCTTTGTAGATTGTAACAACAGTCCCGGAGCGAAATTCATCCACGCAGCTGCATACATGACACTATCTGACATCGTTTCACCAATTTATGTACCCCAAGTTATCCAATCATTCTTTGATCATGATAGGGTGATTAACCACGATGGTCGCACCTTGTCTTTGCTATCAATTCAAATCACAGAGCTTGTGGACGGCATCTTCATTGGATGTTCCATAAATCACAGCATGGTTTATGGAACCTCTTTCTGGCATTTCTTCAATGCATGGTCTGAGGTATTCACTGCACAGGGGAAGAATAGTTCCATAACACTGTCACGCCCACCCATCCTCAAGCGTTGGTTTCCTGATGGCTGTGGTCCAATTATCAACCTTCCTTTCACTCACCATGATGAGTTCATCAGCAGATATGAAGCACCCGTTCTCAGAGAGAGAATTTTCCACTTCTCATCAGAATCAATAGCAAAGCTCAAAGCAAAGGCAAATGCACAGTGCAACAGCAACAAAATCTCCTCTTTCCAGGCATTGTCCGCACTTGTCTGGAGGTCCATAACACGAGCGCGCTGTTTCCCACATGAGCAGGTAACCAGTTGCAGGCTGGCCACCGGTAACAGACCAAGATTGGACCCGCCCTTGCCGGAGAACTACTTTGGGAACTCAATTCAAACGGTGAGAGGCATTGCCACTGCTGGTGAACTGCTTGAACATGATCTTGGGTGGGCAGCCTGGCTCTTGCACCAGGCTGTGGTCGGTCACACTGACAAAGCTGTGCGTGGCTGGCTTGAGTCATGGTTTCAATCCCACTTTATTTATCAGTTAGGAACACCTCAATTCATTCTGTGA 954 0.4769 MATLLDRLKDSLALTLDHFYPLAGRLATKKEDSSPSYVVFVDCNNSPGAKFIHAAAYMTLSDIVSPIYVPQVIQSFFDHDRVINHDGRTLSLLSIQITELVDGIFIGCSINHSMVYGTSFWHFFNAWSEVFTAQGKNSSITLSRPPILKRWFPDGCGPIINLPFTHHDEFISRYEAPVLRERIFHFSSESIAKLKAKANAQCNSNKISSFQALSALVWRSITRARCFPHEQVTSCRLATGNRPRLDPPLPENYFGNSIQTVRGIATAGELLEHDLGWAAWLLHQAVVGHTDKAVRGWLESWFQSHFIYQLGTPQFIL* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0828 317 Gene3D - 1 158 IPR023213 -
Vvi18g0828 317 Gene3D - 168 311 IPR023213 -
Vvi18g0828 317 Pfam Transferase family 6 302 - -
Vvi18g0828 317 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 4 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0828 Vvi-Chr18 8539038 8540052 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0828 8 299 Monolignol Biosynthesis Gene Families AT5G48930 30.744 8.62e-31 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0828 - - vvi:100260914 613.224