Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0818 ATGGAACCTGGAGAGGATTGCTGCGTTAAGGTTGCGGTTCACATCCGACCACTAATCGGTGATGAGAGGCTTCAAGGGTGTAAAGACTGTGTCACTGTCATTCCTGGAAAGCCTCAGGTACAAATTGGAACACATTCCTTTACGTTTGATCATGTCTACGGGAGCACTGGTTCTTCTTCATCTGCCATGTTTGAGGAATGTGTTGCTCCACTTGTTGATGGTCTATTCCAAGGATATAATGCTACCGTCCTTGCTTATGGTCAGACAGGATCTGGGAAAACATACACCATGGGCACTGGCTTCAAAGACAGTTCTCAAATGGGACTAATCCCTCAAGTGATGAATGCTTTGTTCAACAAGATTGAAACTTTGAAGCATCAAACTGAGTTCCAATTGCATGTGTCCTTCATTGAGATTTTAAAAGAAGAAGTACGAGACTTGCTGGATCCCAGTTCTGTGAACAAATCAGAGACTGCAAATGGGCACACAGGAAAAGTACCTGTCCCCGGGAAACCACCGATACAAATTCGTGAGACATCAAATGGTGTTATTACATTGGCAGGGTCTACTGAAATTGGTGTCCGTACATTAAAAGAAATGGCAGCTTGCCTAGAACAAGGATCACTGAGCAGGGCAACAGGAAGTACAAATATGAACAATCAATCAAGTCGCTCGCATGCCATCTTCACCATCACATTAGAGCAAATGAATAAGCTCAATCCTGCTTTTCCTAGTGATAGTGGTCTTAGTGAGAGTATGAGTGAAGAATATCTATGTGCCAAGTTGCATTTAGTAGACCTTGCTGGATCAGAACGAGCTAAAAGAACGGGTTCGGATGGTCTACGATTTAAGGAAGGGGTTCACATTAACAAGGGCCTTCTTGCACTTGGCAACGTCATTAGTGCACTTGGTGATGAGAAAAAAAGGAAAGAAGGCGTTCATGTTCCTTATCGGGACAGTAAACTTACTCGGCTTTTGCAGGATTCACTTGGTGGTAACAGCAGAACTGTCATGATAGCCTGCATTAGTCCTGCTGATATAAATGCTGAAGAAACTCTGAACACCCTAAAGTATGCAAATCGTGCTCGCAATATCCAAAATAAGCCCGTCGTCAACAGAGATCCAATATCCAATGAGATGTTAAAGATGCGCCAACAACTAGAGTATTTGCAGGCAGAACTGTGTGCACGTGGAGGAGGTGCTTCATCTGATGAAACACAGGTTCTCAAGGAAAGGATTGCTTGGCTTGAAGCAACCAATGAGGACCTCTGTCGGGAACTTCATCAATACCGCAGTAGATGCCATGTTACAGAACAATGTGAAACAGATGCCCAAGATGTTCACACCTGTTCAGTGAAAAGTGATGGGCTTAAAAGGGGCTTGTCTAGTGTGGATTCATCTGATTATCAAATGGGTGAAACCATAATGGCAGGGGATTCCAGGGAAATGGATGAAGAAGCAGCAAAAGAATGGGAACATACACTGCTGCAAAATACAATGGACAAAGAGTTGAATGAGCTAAACAAACGTTTAGAGCAAAAGGAGACGGAGATGAAACTTTTTGGAGGGCTTGACACAGTGGCACTTAAGCAGCACTTTGGAAAGAAAATAGTGGAACTAGAGGAGGAGAAAAGAACAGTGCAGCAAGAGAGAGATCGTCTGTTGGCTGAAGTTGAAAACCGTGCTGCTAATTCTGATGGGCAAGCACAAAAATTGCAAGATATTCATGCCCAGAAATTAAAAACACTTGAGGCACAGATACTGGATCTTAAGAAGAAGCAAGAGAGCCAGGTTCAACTTTTGAAGGAAAAACAAAAAAGTGATGAAGCAGCAAAGCGCTTGCAAGATGAAATACAATTTATCAAGGCGCAAAAGGTTCAATTGCAACAAAAGATAAAACAAGAGGCTGAACAGTTTCGACAGTGGAAGGCCTCTCGAGAGAAGGAACTGCTGCAGTTACGGAAGGAGGGGAGGCGGAATGAGTACGAAAGGCATAAACTGCAGACCCTAAATCAGCGTCAAAAAATGGTTCTTCAGCGAAAGACAGAGGAAGCTGCTATGGCCACCAAAAGGCTAAAAGAGTTGCTAGAAGCTCGCAAGTCTTCAGCACGTGAAAACTCAGGTATTACCAATGGAAATGGAACAAATGGGCAGAGCAATGAGAAATCTCTACAACGCTGGCTTGATCATGAGCTAGAAGTCATGGTGAATGTGCATGAAGTTCGTTTTGAATATGAGAAGCAAAGCCAAGTACGAGCTGCACTGGCAGAAGAGTTAGCAGTGCTGAAACAAGTGGATGAGTTTGCTTTGAAGGGGCTTAGTCCTCCACGAGGAAAGAATGGACTTTCTAGAGTGTCCTCCATGTCACCAAATGCAAGGATGGCAAGAATATCTTCTCTTGAGAACATGCTCAGCATTTCCTCAAATTCACTTGTGGCAATGGCTTCACAACTTTCAGAGGCAGAAGAAAGGGAGCGTGCTTTCACTAGCCGTGGACGTTGGAATCAGTTGCGATCAATGGGAGATGCTAAAAGCTTGCTTCAATATATGTTCAATTCTGTTGCAGACACAAGGTGCCAGTTATGGGAGAAGGAATTAGAAATCAAAGAAATGAAAGACCAACTGAAAGAACTTGTAGGTCTACTACGACAGAGTGAATTACGAAGAAAGGAAGTTGAGAAGGAGCTAAAATTGAGAGAACAAGCTGTTGCCATTGCACTGGCTACACAAGCTTCTGCTGGCAATGTTCAGGAGAAGTCGCAGAGCTCATTGAAACACTTTGCTGATGAAATGAGCGGTCCCTTGTCCCCAATGTCTGTCCCAGCACAGAAACAGCTTAAATATACAGCTGGAATTGCTAATGGCTTGGTCAGGGAGCGGGTAGCTTTTATAGATCAGACACGAAAGATGGTACCAGTTGGACCATTGTCAATGAAGAAACTAGCTGTAGTAGGACAAGCTGGGAAGCTGTGGAGATGGAAAAGGAGTCATCACCAGTGGCTATTACAGTTCAAATGGAAGTGGCAGAAACCATGGAGACTCTCAGAATGGATTAGGCACAGTGATGAAACAATCATGAGGGCAAGGCCCCGTACACAGGTTCTGACAGACAAGCTGGGAAGCTATGGAAATGGAAAAGGAGTCGTCAACAGTGGCTGTTACAGTTCAAATGGAAGTGGCAGAAACCATAGAGACTCTCGGAATGGGTTAGGCACAGTGATGAAACAATCATGA 3234 0.4394 MEPGEDCCVKVAVHIRPLIGDERLQGCKDCVTVIPGKPQVQIGTHSFTFDHVYGSTGSSSSAMFEECVAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGFKDSSQMGLIPQVMNALFNKIETLKHQTEFQLHVSFIEILKEEVRDLLDPSSVNKSETANGHTGKVPVPGKPPIQIRETSNGVITLAGSTEIGVRTLKEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMNKLNPAFPSDSGLSESMSEEYLCAKLHLVDLAGSERAKRTGSDGLRFKEGVHINKGLLALGNVISALGDEKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYANRARNIQNKPVVNRDPISNEMLKMRQQLEYLQAELCARGGGASSDETQVLKERIAWLEATNEDLCRELHQYRSRCHVTEQCETDAQDVHTCSVKSDGLKRGLSSVDSSDYQMGETIMAGDSREMDEEAAKEWEHTLLQNTMDKELNELNKRLEQKETEMKLFGGLDTVALKQHFGKKIVELEEEKRTVQQERDRLLAEVENRAANSDGQAQKLQDIHAQKLKTLEAQILDLKKKQESQVQLLKEKQKSDEAAKRLQDEIQFIKAQKVQLQQKIKQEAEQFRQWKASREKELLQLRKEGRRNEYERHKLQTLNQRQKMVLQRKTEEAAMATKRLKELLEARKSSARENSGITNGNGTNGQSNEKSLQRWLDHELEVMVNVHEVRFEYEKQSQVRAALAEELAVLKQVDEFALKGLSPPRGKNGLSRVSSMSPNARMARISSLENMLSISSNSLVAMASQLSEAEERERAFTSRGRWNQLRSMGDAKSLLQYMFNSVADTRCQLWEKELEIKEMKDQLKELVGLLRQSELRRKEVEKELKLREQAVAIALATQASAGNVQEKSQSSLKHFADEMSGPLSPMSVPAQKQLKYTAGIANGLVRERVAFIDQTRKMVPVGPLSMKKLAVVGQAGKLWRWKRSHHQWLLQFKWKWQKPWRLSEWIRHSDETIMRARPRTQVLTDKLGSYGNGKGVVNSGCYSSNGSGRNHRDSRNGLGTVMKQS* 1078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0818 1077 FunFam kinesin-like protein KIN-4A isoform X1 2 393 - -
Vvi18g0818 1077 ProSiteProfiles Kinesin motor domain profile. 8 365 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi18g0818 1077 Coils Coil 597 645 - -
Vvi18g0818 1077 Coils Coil 530 593 - -
Vvi18g0818 1077 Coils Coil 854 902 - -
Vvi18g0818 1077 MobiDBLite consensus disorder prediction 698 722 - -
Vvi18g0818 1077 MobiDBLite consensus disorder prediction 151 175 - -
Vvi18g0818 1077 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 396 IPR027417 -
Vvi18g0818 1077 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 1 1040 IPR027640 GO:0003777|GO:0007018
Vvi18g0818 1077 Pfam Kinesin motor domain 39 365 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi18g0818 1077 CDD KISc_KIF4 7 366 - -
Vvi18g0818 1077 MobiDBLite consensus disorder prediction 1053 1077 - -
Vvi18g0818 1077 PRINTS Kinesin heavy chain signature 315 336 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi18g0818 1077 PRINTS Kinesin heavy chain signature 261 279 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi18g0818 1077 PRINTS Kinesin heavy chain signature 216 233 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi18g0818 1077 PRINTS Kinesin heavy chain signature 78 99 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi18g0818 1077 ProSitePatterns Kinesin motor domain signature. 260 271 IPR019821 GO:0003777|GO:0005524|GO:0007018
Vvi18g0818 1077 MobiDBLite consensus disorder prediction 703 722 - -
Vvi18g0818 1077 Coils Coil 678 698 - -
Vvi18g0818 1077 Coils Coil 497 517 - -
Vvi18g0818 1077 SMART kinesin_4 6 373 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi18g0818 1077 Gene3D Kinesin motor domain 2 393 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0818 Vvi-Chr18 8429672 8444610 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0818 9 398 Calmodulin-binding Proteins AT5G65930 33.503 1.46e-53 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0818 - - vvi:100255840 2092.39