Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0815 ATGCTAACTGGTTGTCTGCCCCTCGAGATAGGATTTTTAAAGGAGGCCAGGGTGTTCGATGTAGGAAACAATCGGCTTACAGGTCCAATACCATTCTCCTTGGGTTGCCTGGAGAAGGTGGAGGAGCTCAACTTTGCCGGTAAACTCTTCTATGGAATGGTGCCAGAGGTGCTTTGTCAACTCCCAAATTTGTTGAATTTGTCTTTGTATGATAATTATTTTATGCAAGTAGGGCTAGCATGTAGGAGCTTGATTTGGAAGGGGCTCTTGGATATTAGAAAGAACTGCATTCCTGATCTGCCATTTCAAAGATCCGTAGCTGAATGCGCAGATTTATTTCAGTACCCAAGGTTCTGTCCTTACATGAACTCACATTCCTTGCAAGCCTCGGCATCTTGGTTCTCCGGGTTCTTTGATTCCCTAAAATGGCTGCTTAGCCTTGTCATTCTCTTTTCATGCAAACCACTTTGA 471 0.4416 MLTGCLPLEIGFLKEARVFDVGNNRLTGPIPFSLGCLEKVEELNFAGKLFYGMVPEVLCQLPNLLNLSLYDNYFMQVGLACRSLIWKGLLDIRKNCIPDLPFQRSVAECADLFQYPRFCPYMNSHSLQASASWFSGFFDSLKWLLSLVILFSCKPL* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0815 156 Gene3D Ribonuclease Inhibitor 1 150 IPR032675 -
Vvi18g0815 156 SUPERFAMILY L domain-like 2 147 - -
Vvi18g0815 156 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 2 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0815 Vvi-Chr18 8412439 8412909 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0815 2 75 Leucine-rich Repeat extension Gene Families AT3G22800 35.135 4.12e-08 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0815 - - vvi:100852519 317.39