LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vvi18g0814	ATGAGCGGCCTTTTCTCCATCAGTACTAAATTTTCAACCTTGTGCATATGCCTCATATTTCTTGCCATCAATACTGAAGGAGAGAGTAGCAACAGAGAAATTTTGGAGCTCACTATTGGTGGCGGCAGTGGCGACAGAGGCGGTGGTGGAGGTGGAAACAGAACACAAAAGGTGAAACTTTGGAATCCATTTTGTTCACTTCCTCCCCACTTTGCATTGCAATTTCCACCACTACCATACGGTATACCACCACCACCACCTCCCGTCGGACCAGAAGTTTTGGTCTTTGACGACCAAAGGCGCGCTGTGGTTTACCCTGTCATCCAAAAATTCAAGGCCATAATCACCTCAGTCCCTCTAGGCATCGCCAAATCCTGGCAAGGTTTGGACATATGCAGCTGCAAAGGATTCTACTGTGACAATCCACCAGACAACAAAACCGCCATTGCTCTCGCCTCCATTGACTTCAACGGATTCCAGCTTGGCGCCCCCACCCTCGATGGCTTCATCAACCAACTTACAGACATTGCTCTCTTTCATGCAAATTCCAACAACTTTGCCGGCACCAACCCTCCGGATATTGCCAAGCTACCTTGTCTCTACGAGCTAGACATAAGTAACAATAAATTGTCAGGCTCATTTCCAAGGGCAATTTTGGGAATTAAAAGCCTAACCTTCTTGGATATTCGGTTCAATCTCTTTACTGGGTCCGTACCATCTCAATTATTTTCACAGAATCTTGATGTCCTCTTCATCAAAGATAACAATTTCAGGCAGACGCTGCCTGATAACCTGGGCAACACTCACGTTCTTTGTCTTATATTTTAG	828	0.4589	MSGLFSISTKFSTLCICLIFLAINTEGESSNREILELTIGGGSGDRGGGGGGNRTQKVKLWNPFCSLPPHFALQFPPLPYGIPPPPPPVGPEVLVFDDQRRAVVYPVIQKFKAIITSVPLGIAKSWQGLDICSCKGFYCDNPPDNKTAIALASIDFNGFQLGAPTLDGFINQLTDIALFHANSNNFAGTNPPDIAKLPCLYELDISNNKLSGSFPRAILGIKSLTFLDIRFNLFTGSVPSQLFSQNLDVLFIKDNNFRQTLPDNLGNTHVLCLIF*	276

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vvi18g0814	275	Gene3D	Ribonuclease Inhibitor	106	273	IPR032675	-
	Vvi18g0814	275	SUPERFAMILY	L domain-like	110	271	-	-
	Vvi18g0814	275	PANTHER	LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED	91	274	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vvi18g0814	Vvi-Chr18	8411528	8412355	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vvi18g0814	94	275	Leucine-rich Repeat extension Gene Families	AT3G24480	42.308	3.00e-42	149

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vvi18g0814	-		-	vvi:100852519	513.457