Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0810 ATGATGGATGGTATGGTTTTGAGAACATGTACAAGTGGGTTGTTTGGACCATGTTTCCTACGCACACATTATACACGCGTGGGTGTGGCATTCCTTTTGTTTGTTCTTTTTCTTTCTAATTGTGACTGCAACTGGGTATACTGTTGTGGCTTTTGTTCTCTCTTCTCTCTCGCGACAATGGAAAGTGGAGTTCCCATGCTTAATTGTCTGTTGCAGCATGCATTGAGAGGCCTATGTTCTTGTTCAGATTCTTCCAACTCTTCAAAGTGGGTGTATGCAGTTTTCTGGAGGATCTTACCTCGGAACTACCCTCCACCAAAGTGGGATTATGGAGGGGGAGCTCTTGATCGCTGCAAAGGGAACAAGAGGAACTGGATTCTTGTTTGGGAAGATGGGTTTTGTGATTTCTATGAGTGTGAACGAGCCGGGGGCGAATACATGAAGGGCAGGTTTGGTGCTGATGTCTTCTTCAAAATGTCCCATGAGGTCTATAATTATGGTGAAGGATTAGTGGGAAAAGTTGCAGCAGACAACAGTCACAAATGGGTGTTCAGAGAAAGCCCAAATGAGAATGATCCTGGCTTCATCTCTTCATGGAATGTGTCAATTGACCCTCAACCAAGAGCTTGGGAGTTCCAGTTCAATTCTGGCATTCAGACAATTGCCATCATTTCTGTACGAGAAGGTATCATTCAACTGGGCTCATTCGATAAGATGGTGGAAGATCTCAATCTGGTGATTAGCATACAGAGGAAATTCAGCTACCTCCAGAGCATACCTGGCATTTTCTCCATACAGAGACCATATCTACCCATCCAACAACCAAACGCCACTGAAACAAGTTTCTCACCAGAAGAAAAGTGCCAACTAGCCGGAGCAAAGAGACTGTACAGCGACAGACCCGGCGAGCCTCCCATCAAGTCCATCAACTTGGGCTGGAACAGCCCACAAAACGGTGTTGCGGGACCTGCCATTTGGTCTATCCCACCTCTTTTACCCACCATGTCTTGCAGTCTCGGAGCTCTGTTATCAAAGCTCCCTTCAGTTCTGCCATCCTACAACCACATTGAAGCTCATGACACAACTCTGCTTAGCAATAACAGCAACAGCAACATCAATAGCACAAGCCAGAGGTTGAAAGTTAATGGTGTTGGTGGGTTAAATGAAATTCAAATTGCCGGTATAAAATTGGAATCATCCTGCCTGATGGACACAAATCAAGAAGAGAAACCCAGTCCACTGGATCCATGTTTAGGGTTGCGAGATGAATTAGGGTTTGGACGTGCAAGGGAGGGAGGTCGTGCTCTAAATCTCAATTAA 1320 0.4545 MMDGMVLRTCTSGLFGPCFLRTHYTRVGVAFLLFVLFLSNCDCNWVYCCGFCSLFSLATMESGVPMLNCLLQHALRGLCSCSDSSNSSKWVYAVFWRILPRNYPPPKWDYGGGALDRCKGNKRNWILVWEDGFCDFYECERAGGEYMKGRFGADVFFKMSHEVYNYGEGLVGKVAADNSHKWVFRESPNENDPGFISSWNVSIDPQPRAWEFQFNSGIQTIAIISVREGIIQLGSFDKMVEDLNLVISIQRKFSYLQSIPGIFSIQRPYLPIQQPNATETSFSPEEKCQLAGAKRLYSDRPGEPPIKSINLGWNSPQNGVAGPAIWSIPPLLPTMSCSLGALLSKLPSVLPSYNHIEAHDTTLLSNNSNSNINSTSQRLKVNGVGGLNEIQIAGIKLESSCLMDTNQEEKPSPLDPCLGLRDELGFGRAREGGRALNLN* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0810 439 PANTHER TRANSCRIPTION FACTOR MYC/MYB-RELATED 61 410 - -
Vvi18g0810 439 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 71 253 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0810 Vvi-Chr18 8362029 8363939 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0810 72 257 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 32.620 2.58e-16 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0810 - - vvi:100267842 880.937