Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0793 ATGGACGCCAACCTAAATTCAATCCTTCCTGCGACGCTCAAGAGGCTGGTTTCCTCCTATTCCCTCATCTTGAGTTCTACGGCTACGATTATGGCTTCCACCCCAATTACTCCATGGAGAGTTGTAAAATGTTGTGCTTGCAAAGCGTTCCAATATAAATTTCACGAGGGCAAGGGCGTGTATAACTGTTTCCCCAAGACACTGTTATTTAATGGATACAGTACACCTGGTTTTCAAGGAAATGTAGATTTGAAATTGCCCAAAGCCCATATCGCTTCCTATCAAAATTCGGTCGAGAAATTCATGCTGGATTGCTCAAGGGAGCTTCAAAAGCAGCTACCCAGAACATATGGATTATTGAGGTTTATGCTCTGGTTTGCCTGCGCGATTGGAGGAGTTGAGATGATATGCATAGTTTCAGTGTGGTGTTTCTTGAGGAAGGCCCATCAAAACCCCATTGCAGATCCGGAAGGATACCTTTTAGTAGCAACGCGGTTCAGAAGATTCACCTATACTGAACTGAAAAGGGCAACACAAGGTGTCAGTGAAGAGATTGCAAGAGGAGGAGGCGGTGTTGTATATAAAGGTTTCTTGTCGGACCATCGTGGAGAAGACAATTCGAGCTTCTCGAGAATAAGAGGAACCAGAGGTTACATGGCTTCGGAGTGGGTTTTAAACCTCCCAAGCACCTCCAAAGTGGACGTTTTTAGCTATGGTATTGTGGTTTTGGAGATGATTACGGGGAAGAATCCTGCAACGGAAATCCAAGCGGTTGATGGTGTGAGAAGGGAGCATCAAAGGTTGGTAGAATGGGTGAGAGGGAAGATGAACGGAGAAACTACAAGGGCTTCATATGAATGGATAGAAGAAATCGTGGACCCTGTGATGAAAAGCAAAATATGA 903 0.4474 MDANLNSILPATLKRLVSSYSLILSSTATIMASTPITPWRVVKCCACKAFQYKFHEGKGVYNCFPKTLLFNGYSTPGFQGNVDLKLPKAHIASYQNSVEKFMLDCSRELQKQLPRTYGLLRFMLWFACAIGGVEMICIVSVWCFLRKAHQNPIADPEGYLLVATRFRRFTYTELKRATQGVSEEIARGGGGVVYKGFLSDHRGEDNSSFSRIRGTRGYMASEWVLNLPSTSKVDVFSYGIVVLEMITGKNPATEIQAVDGVRREHQRLVEWVRGKMNGETTRASYEWIEEIVDPVMKSKI* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0793 300 Gene3D Transferase(Phosphotransferase) domain 1 191 300 - -
Vvi18g0793 300 Pfam Protein kinase domain 206 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi18g0793 300 PANTHER OS07G0415500 PROTEIN 41 202 - -
Vvi18g0793 300 SUPERFAMILY Protein kinase-like (PK-like) 207 261 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0793 Vvi-Chr18 8201566 8203095 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0793 210 294 Trihelix Transcription Factor Family AT5G38560 37.647 7.20e-10 57.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Vvi18g0793 Pkinase 2.4e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0793 - - vvi:100247193 208.379