Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0791 ATGGATGCGCCAGTTCTTTTGCTTCTTCTCACTCTGCTTCTATCTTCTCCACTTCCATCGTCCACCCTCGACAGTTTGAGTCAAGGCTCATCCCTCTCAGTTGGGAAGCCTGAACAAGTTTTGATTTCACAAAGTGGAATCTTCTCAGCTGGCTTCTACCCCGTCGGTGATAATGCTTGTTGTCTTGCCATATGGTTCACCAAACCATCCTACGACGGCAAACATACCGCTGTTTGGATGGCAAACCGAAACCAACCAGTTAATGGGAATTTCTCAAAGCTTTCCCTTCTAGAAAGTGGTGATCTTATCTTAACAGATGCTGGGCGGTTCATAGTTTGGACCATAAAGAGGGTTGGGATTTCTCCGGTGCAATTACACCTCTTCAACACTGGTAACCTTGTGCTGCGTACCTCGGATGGTGTTATTCAATGGCAAAGTTTCGATTCACCAACAGATACCCTTCTCCCTCACCAACCACTCACCAGAAATACGAGACTCGTCTCTTCAAGAACCAAAACCAACTTTTTCTCAGGGTTTTATAAGCTCTATTTTGACAACAATAACGTCCTCAGTCTTGTCTTCGATGGGCGGGATGCTTCAAGCATTTACTGGCCCCCATCGTGGCTTGTAAGCTGGCAGGCGGGAAGATCGGCATACAACAGCAGCAGAACTGCATTACTAGATTACTTTGGCTATTTTTCTTCAACCGACGATTTTAAGTTTCAGTCCTCGGATTTTGGTGAGAGAGTCCAAAGAAGATTGACCCTGGATATTGATGGCAACTTACGATTATACAGTTTTGAGGAAGGGAGAAATAAGTGGGTTGTTACTTGGCAAGCCATCACGCTACAATGCAACATTCATGGAATATGCGGACCCAACAGTATTTGTACCTATGTGCCTGGTTCTGGGAGTGGAAGGAGATGCTCTTGCGTACCTGGATATGAGATGAAAAATCGCACTGACCGAACTTATGGATGCATACCAAAATTCAATCTTTCTTGCGACTCACAGAAGGTTGGTTTCCTCCCACTCCCACACGTTGAGTTCTACGGCTATGATTATGGCTATTACCTCAATTACACCTTACAGATGTGTGAAAAACTGTGCTTGAAAATATGTGGCTGCATAGGATATCAATACAGCTATAATTCGGATGTTTATAAATGTTGTCCTAAGCGGCTGTTTCTCAACGGATGCCGCTCGCCTAGTTTTGGAGGACATACATATCTAAAATTGCCTAAAGCTAGTCTTCTTTCCTATGAAAAACCACAAAACACCAGTACAGATCCGCCAGGCTACATTTTAGCTGCCACGGGATTCAGAAAATTCACCTATATTGAGCTGAAGAAAGCAACACGGGGTTTCAGTGAGGAGATTGGCAGAGGAGGGGGTGGGGTTGTATATAAAGGTGTCTTATCAGACCACCGAGTGGCAGCCATCAAGCAGCTCAGTGGAGCTAACCAAGGAGAATCTGAATTCTTGGCAGAAGTAAGTACCATTGGGAGGCTTAACCACATGAACTTGATAGAGATGTGGGGTTATTGCTTTGAGGGGAAGCACAGGCTCTTGGTTTATGAATACATGGAGCATGGATCACTAGCACAAAACCTCACTTCCAATACACTTGATTGGCAGAAGAGGTTCGATATTGCGGTGGGCACAGCAAAAGGTCTGGCTTATTTACACGAAGAGTGCTTGGAGTGGGTTATACACTGCGATGTGAAGCCTCAAAACATACTCCTAGACTCTAATTATCAGCCAAAGGTGGCAGACTTCGGCCTGTCAAAGTTACAGAACAGAGGAGGAATCAACAATTCGAGATTGTCGAGGATCAGAGGAACGAGAGGTTACATGGCTCCAGAATGGGTTTTGAACCTCCCCATCACCTCCAAAGTAGACGTTTATAGCTATGGTATTGTGGTTCTGGAGATGATTACCGGCCTAAGAAGTGTTGCAAATGCCATCCACGGTACAGATGGCATAGGGGAACGTCAGAGTTTGGTGGCATGGGTGAAAGGGAAGATGAATAGTGCAACTGCAGTTGCTTCGTGGATTGAAGAAATCCTAGACCCGTCGATGGAAAGCCAATATGACATGGGTGAGATGGAAATTCTAGTAGCAGTGGCTCTGCAATGTGTGGAATTGGACAAGGATGAAAGACCCACCATGAGTCAGGTGGTCGAGACGCTTCTCCGCCCTGAACGTGGAAACAATCATCACTATTAA 2229 0.4536 MDAPVLLLLLTLLLSSPLPSSTLDSLSQGSSLSVGKPEQVLISQSGIFSAGFYPVGDNACCLAIWFTKPSYDGKHTAVWMANRNQPVNGNFSKLSLLESGDLILTDAGRFIVWTIKRVGISPVQLHLFNTGNLVLRTSDGVIQWQSFDSPTDTLLPHQPLTRNTRLVSSRTKTNFFSGFYKLYFDNNNVLSLVFDGRDASSIYWPPSWLVSWQAGRSAYNSSRTALLDYFGYFSSTDDFKFQSSDFGERVQRRLTLDIDGNLRLYSFEEGRNKWVVTWQAITLQCNIHGICGPNSICTYVPGSGSGRRCSCVPGYEMKNRTDRTYGCIPKFNLSCDSQKVGFLPLPHVEFYGYDYGYYLNYTLQMCEKLCLKICGCIGYQYSYNSDVYKCCPKRLFLNGCRSPSFGGHTYLKLPKASLLSYEKPQNTSTDPPGYILAATGFRKFTYIELKKATRGFSEEIGRGGGGVVYKGVLSDHRVAAIKQLSGANQGESEFLAEVSTIGRLNHMNLIEMWGYCFEGKHRLLVYEYMEHGSLAQNLTSNTLDWQKRFDIAVGTAKGLAYLHEECLEWVIHCDVKPQNILLDSNYQPKVADFGLSKLQNRGGINNSRLSRIRGTRGYMAPEWVLNLPITSKVDVYSYGIVVLEMITGLRSVANAIHGTDGIGERQSLVAWVKGKMNSATAVASWIEEILDPSMESQYDMGEMEILVAVALQCVELDKDERPTMSQVVETLLRPERGNNHHY* 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0791 742 Gene3D - 20 149 IPR036426 -
Vvi18g0791 742 Pfam Protein kinase domain 457 729 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi18g0791 742 PANTHER OS07G0415500 PROTEIN 432 732 - -
Vvi18g0791 742 Pfam S-locus glycoprotein domain 245 318 IPR000858 GO:0048544
Vvi18g0791 742 CDD PAN_AP_plant 331 414 - -
Vvi18g0791 742 CDD EGF 285 320 - -
Vvi18g0791 742 Pfam D-mannose binding lectin 76 167 IPR001480 -
Vvi18g0791 742 SMART serkin_6 454 732 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi18g0791 742 ProSiteProfiles Bulb-type lectin domain profile. 23 148 IPR001480 -
Vvi18g0791 742 FunFam S-receptor-like serine/threonine-protein kinase 422 528 - -
Vvi18g0791 742 ProSitePatterns Serine/Threonine protein kinases active-site signature. 570 582 IPR008271 GO:0004672|GO:0006468
Vvi18g0791 742 Gene3D Transferase(Phosphotransferase) domain 1 529 741 - -
Vvi18g0791 742 FunFam Serine/threonine-protein kinase 529 739 - -
Vvi18g0791 742 ProSiteProfiles Protein kinase domain profile. 454 742 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi18g0791 742 SUPERFAMILY alpha-D-mannose-specific plant lectins 60 193 IPR036426 -
Vvi18g0791 742 SUPERFAMILY Protein kinase-like (PK-like) 430 731 IPR011009 -
Vvi18g0791 742 SMART blect_4 32 150 IPR001480 -
Vvi18g0791 742 FunFam Putative receptor protein kinase ZmPK1 20 149 - -
Vvi18g0791 742 Gene3D Phosphorylase Kinase; domain 1 422 528 - -
Vvi18g0791 742 ProSitePatterns Protein kinases ATP-binding region signature. 460 482 IPR017441 GO:0005524
Vvi18g0791 742 PIRSF SRK 423 740 IPR024171 GO:0004674
Vvi18g0791 742 PIRSF SRK 1 431 IPR024171 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0791 Vvi-Chr18 8190899 8193301 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0791 444 731 Trihelix Transcription Factor Family AT5G38560 42.857 3.10e-68 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Vvi18g0791 Pkinase 2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0791 - - csin:114321139 924.85