Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0786 ATGGATAGGACAGTTGGTTTCTTTGTTTTGGCTTTGCTATTAACTTGCTATCCATCTTCATCTGAAACGTATGATACTCTGAGCGAAGGCTCGTCTCTTTCCGTGGAGAAATCAAATGATCTTCTCATTTCAGCAAATGGTATATTCTCTGCTGGGTTTTATCAGGTCGGCAACAACACTTTCTGCTTCGCCATATGGTTTACAAAATCATGGGGTGCAACCACAGTTTGGATGGCGAACCGTGACCAACCGGTCAACGGTAGAGGCTCCAAGCTTTCTTTGTTGAGGAATGGCAATCTCCTCTTAACTGATGCTGGTAAAATCATGGTTTGGATGATCAACACCGTTTCAACCTCATCTGCGAGATTACAGCTCCTTAACACCGGCAATCTTGTTCTATATGCTTGGGAGAAGACGGTGATTTGGCAGAGCTTTGACTCACCCACAGATACTCTTCTTCCTCACCAGATACTGACCAAAGATACCAGCCTTATCTCCTCAAGAAGCCAAAGCAACTATTCTTCTGGTTTTTATAAGCTATTTTTTGACAGTGATAACGTCATCCGCCTTCTCTTCAATGGTACTGAGGTTTCCAGCATCTACTGGCCAGACCCAAGCCTGGTGACCTGGGATGCTGGAAGAAGCACATACAACAACAGTCGAATCGCAGTATTCGATTCTTTGGGTTATTATAGAGCATCAGATGATTTGGAATTTCGGTCAGCGGATTTTGGTGCGGGGCCTCAGAGAAGATTGGCCCTCGATTTCGATGGCAATCTTAGAATGTATAGTCTAGAAGAAACGAGAGGAACCTGGTCGGTTTCATGGCAGGCTATCTCCCAACCATGCCAGATTCATGGCATCTGCGGACCCAACAGTCTCTGCAGTTACACCCCTGCTTATGGCAGAGGATGCTCTTGCATGCCTGGATTCAAGATTGTAAATTCAACTGACTGGTCTTATGGGTGCGCACCAGAAACTGATATCGCTTGTAACCAAACTGAGGTGGGCTTCTTCCCACTCCCTCATGTTCAACTCTACGGCTATGACTATGGTCACTACCCCAATTACACCTATGAAAGCTGTGAAAATCTATGCTTACAGTTGTGCAAATGCAAGGCCTTCCTGCTAAATTTTAGCGACGGCCTTTACGGTTGTTACCCAAAGACCCTCTTGCTTAATGGATTCAGTTCGCCAAATTATCCTGGAACCATGTATCTAAAACTGCCTAAAGCTAGTCTCTTTCCCAGATATGATCCTCTTGAAGAATTCACCATAAATTGTTCAGGCAACACTCGTTATATACAGCTAGATACAACATATCGCAAGGGCCACGAAAATGGGTCATTGAAGTTTTTGCTGTGGTTTGCCTACGTACTGGGAGTTCTAGAGGGGGCAATTGTCTTGCTGGTATGGCTTTTCTTATTTTGGGTACACCATGATCCAGTCTCGACCATGCAAGGCTACATCCTCGTTGCAAACGGGTTTAAAAGATTCAGCTATGCAGAGTTGAAGAAGGCCACGCGAGGTTTCACCCAAGAGATTGGAAGAGGAGGTGGAGGAGTGGTATATAAAGGTGTATTGCTTGATCGTCGAGTGGCAGCAATCAAGCGCCTCAAAGAAGCCAATCAAGGAGAAGCAGAATTTCTAGCAGAAGTGAGCACCATTGGAAGGCTTAATCACATGAACTTAATAGAGACGTGGGGATATTGCATAGAGGGGAAGCACCGGCTGTTGGTGTATGAGTACATGGAACATGGATCCTTGGCACAAAAGCTATCTTCCAATACTCTTGATTGGGAGAAGAGGTTCCAAATAGCGCTTGGCACGGCCAGAGGCCTAGCTTATTTACACGAAGAATGCTTGGAGTGGGTTCTGCACTGTGATGTCAAGCCTCAGAACATACTCTTGGACTCTAATTACCAGCCAAAAGTGGCCGATTTTGGGATGTCGAAACTGCGAAACAGAGGAGGGCTTGACAATTCAAGTTTCTCGAGGATCAGAGGAACCAGAGGATACATGGCTCCTGAATGGGTATTCAACCTTCCCATAACCTCCAAGGTAGACGTTTATAGCTATGGAATCGTGGTTTTGGAGATGGTGACAGGGAAGAGCCCAACTGCTATCCCCGATACTGATGCCCAAGGAGAGACAGAGCAGCGTGGGTTGATTAAATGGGTGAGGGATCGAATGAATGGGATTGGTGCCAGGGGGTCGTGGATTGAAGACATCCTGGACCCTGTGATGCAAGGCGAATGCGACCTGCGCCGGATGGAAATTCTGATTGGAGTTGCCTTGGAATGTGTGGAGGAAGACAGGGACTCAAGACCCACGATGAGCCAGATAGTTGAGAAGCTTATGTGCCCGGAGGAGAGGCCGGAGGAGGACGGCTACCTCTCCATGTCCTGA 2409 0.467 MDRTVGFFVLALLLTCYPSSSETYDTLSEGSSLSVEKSNDLLISANGIFSAGFYQVGNNTFCFAIWFTKSWGATTVWMANRDQPVNGRGSKLSLLRNGNLLLTDAGKIMVWMINTVSTSSARLQLLNTGNLVLYAWEKTVIWQSFDSPTDTLLPHQILTKDTSLISSRSQSNYSSGFYKLFFDSDNVIRLLFNGTEVSSIYWPDPSLVTWDAGRSTYNNSRIAVFDSLGYYRASDDLEFRSADFGAGPQRRLALDFDGNLRMYSLEETRGTWSVSWQAISQPCQIHGICGPNSLCSYTPAYGRGCSCMPGFKIVNSTDWSYGCAPETDIACNQTEVGFFPLPHVQLYGYDYGHYPNYTYESCENLCLQLCKCKAFLLNFSDGLYGCYPKTLLLNGFSSPNYPGTMYLKLPKASLFPRYDPLEEFTINCSGNTRYIQLDTTYRKGHENGSLKFLLWFAYVLGVLEGAIVLLVWLFLFWVHHDPVSTMQGYILVANGFKRFSYAELKKATRGFTQEIGRGGGGVVYKGVLLDRRVAAIKRLKEANQGEAEFLAEVSTIGRLNHMNLIETWGYCIEGKHRLLVYEYMEHGSLAQKLSSNTLDWEKRFQIALGTARGLAYLHEECLEWVLHCDVKPQNILLDSNYQPKVADFGMSKLRNRGGLDNSSFSRIRGTRGYMAPEWVFNLPITSKVDVYSYGIVVLEMVTGKSPTAIPDTDAQGETEQRGLIKWVRDRMNGIGARGSWIEDILDPVMQGECDLRRMEILIGVALECVEEDRDSRPTMSQIVEKLMCPEERPEEDGYLSMS* 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0786 802 SUPERFAMILY alpha-D-mannose-specific plant lectins 61 205 IPR036426 -
Vvi18g0786 802 PANTHER OS07G0415500 PROTEIN 10 788 - -
Vvi18g0786 802 FunFam S-receptor-like serine/threonine-protein kinase 479 583 - -
Vvi18g0786 802 Pfam S-locus glycoprotein domain 250 313 IPR000858 GO:0048544
Vvi18g0786 802 Gene3D Phosphorylase Kinase; domain 1 478 583 - -
Vvi18g0786 802 CDD PAN_AP_plant 327 410 - -
Vvi18g0786 802 CDD B_lectin 42 148 IPR001480 -
Vvi18g0786 802 FunFam Serine/threonine-protein kinase 584 794 - -
Vvi18g0786 802 Gene3D Transferase(Phosphotransferase) domain 1 584 797 - -
Vvi18g0786 802 ProSiteProfiles PAN/Apple domain profile. 331 410 IPR003609 -
Vvi18g0786 802 ProSiteProfiles Protein kinase domain profile. 509 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi18g0786 802 Gene3D - 20 146 IPR036426 -
Vvi18g0786 802 ProSiteProfiles Bulb-type lectin domain profile. 18 146 IPR001480 -
Vvi18g0786 802 PIRSF SRK 1 796 IPR024171 GO:0004674
Vvi18g0786 802 SUPERFAMILY Protein kinase-like (PK-like) 486 786 IPR011009 -
Vvi18g0786 802 SMART blect_4 33 148 IPR001480 -
Vvi18g0786 802 SMART serkin_6 509 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi18g0786 802 ProSitePatterns Serine/Threonine protein kinases active-site signature. 625 637 IPR008271 GO:0004672|GO:0006468
Vvi18g0786 802 Pfam D-mannose binding lectin 74 162 IPR001480 -
Vvi18g0786 802 FunFam Putative receptor protein kinase ZmPK1 21 147 - -
Vvi18g0786 802 Pfam Protein kinase domain 512 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi18g0786 802 ProSitePatterns Protein kinases ATP-binding region signature. 515 537 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0786 Vvi-Chr18 8157249 8159657 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0786 491 791 Trihelix Transcription Factor Family AT5G38560 39.414 4.44e-63 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Vvi18g0786 Pkinase 3.2e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0786 - - vvi:100243693 1552.73