Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0785 ATGGATGCGCCAGTTCTTTTGCTTCTTCTCACTCTGCTTCTATCTTCTCCACTTCCATCGTCCAACCTCGACAGTTTGAGTCAAGGCTCATCCCTCTCAGTTGGGAAGCCTGAACAAGTTTTGATTTCACAAAGTGGAATCTTCTCAGCTGGCTTCTACCCCGTCGGTGATAATGCTTATTGTCTTGCCATATGGTTCACCAAACCATCCTACGACGGCAAACATACCGCTGTTTGGATGGCAAACCGAAACCAACCAGTTAATGGGAATTTCTCAAAGCTTTCGCTGCTAGAAAGTGGTGATCTTATCTTAACAGATGCTGGGCGGTTCATAGTTTGGACCATAAAGAGGGTTGGGATTTCTCCGGTGCAATTACACCTCTTCAACACTGGTAACCTTGTGCTGCGTACCTCGGATGGTGTTATTCAATGGCAAAGTTTCGATTCACCAACAGATACCCTTCTCCCTCACCAACCACTCACCAGAAATACGAGACTTGTCTCTTCAAGAACCAAAACCAACTTTTTCTCAGGGTTTTATAAGTTCTATTTTGACAACAATAATGTCCTCATTCTTGTCTTCGATGGGCCGGACGCTTCAGGCATTTACTGGCCCCCATCGTGGCTTGTAAGCTGGCAGGCGGGAAGATCGGCATACAACAGTAGCAGAACTGCGTTACTAGATTACTTTGGCTATTTTTCTTCAACCGACGATTTGAAGTTTCAGTCCTCGGATTTTGGTGAGAGAGTCCAAAGAAGATTGACCCTGGATATTGATGGCAACTTACGATTATACAGTTTTGAGGAAGGGAGAAATAAGTGGGTTGTTACTTGGCAAGCCATCACGCTACAATGCAACATTCATGGAATATGCGGACCCAACAGTATTTGTACCTATGTGCCTGGTTCTGGGAGTGGAAGGAGATGCTCTTGCATACCTGGATATGAGATGAAAAATCGCACTGACCGAACTTATGGATGCATTCCTAAATTCAATCTTTCTTGCGACTCACAGAAGGTTGGTTTCCTCCTACTCACACACTTTGAGTTCTACGGCTATGATTATGGCTATTACCCCAATTACACCTTACAGATGTGTGAAAAACTGTGCTTGGAAATATGTGGCTGCATGGGATTTCAATACAGCTATACTTCGGATAATTATAAATGTTATCCTAAGCGGCTGTTGCTCAACGGATACCGCTCGCCTGGTTTTTTAGGACATATATATCTAAAATTGCCTAAAGCTAAGCAGCTAGTAAGATCTTATGCAAAAGCCCACGAAAATGAAGTGTTAAAGTTCATCCTCTGGTTTGCGTGCGCAATTGGAGCAGTTGAGATGGTTTGCATCTGTATGGTGTGGTGTTTCTTGATGAAGGCCCAGCAAAACACCAGTACAGATCCGCCAGGCTACATTTTAGCTGCCACGGGATTCAGAAAATTCACCTATACTGAGCTGAAGAAAGCAACACGGGGTTTCAGTGAGGAGATTGGCAGAGGAGGAGGTGGGGTTGTATATAAAGGTGTCTTATCAGATCACCGAGTGGCAGCCATCAAGCAGCTCAGTGGAGCTAACCAAGGAGAATCTGAATTCTTGGCAGAAGTAAGTACCATTGGGAGGCTTAACCACATGAACTTGATAGAGATGTGGGGTTATTGCTTTGAGGGGAAGCACAGGCTCTTGGTTTATGAATACATGGAGCATGGATCACTAGCACAAAACCTCACTTCCAATACACTTGATTGGCAGAAGAGGTTCGATATTGCGGTGGGCACAGCAAAAGGCCTGGCTTATTTACACGAAGAGTGCTTGGAGTGGGTTCTACACTGCGATGTGAAGCCTCAAAACATACTCCTAGACGTTAATTATCAGCCAAAGGTGGCAGACTTCGGCCTGTCAAAGTTACAGAACAGAGGAGAAATCAACAATTCGAGATTGTCGAGGATCAGAGGAACAAGAGGTTACATGGCTCCAGAATGGGTTTTGAACCTCCCCATCACCTCCAAAGTAGACGTTTATAGCTATGGTATTGTGGTTCTGGAGATGGTTACCGGCCGAAGGAGTGCTTCAATGGCCATCCACGGTACAGATGGCATAGGGGAACGTCAGAGTTTGGTGGCATGGGTGAAAGGGAAGATGAATGGAGCAACTGCAGTTGCTTCGTGGATGAAAGAAATCCTAGACCCGTCGATGGAAGGCGAATATGACATGGGTGAGATGGAAATTCTAGTAGCAGTGGCTTTGCAATGTGTGGAATTGGACAAGGATGAAAGACCCACCATGAGTCAGGTGGTCGAGACGCTTCTCCGCCCCGAACGTGGAAACAATCTTCACTACTATTAA 2343 0.4537 MDAPVLLLLLTLLLSSPLPSSNLDSLSQGSSLSVGKPEQVLISQSGIFSAGFYPVGDNAYCLAIWFTKPSYDGKHTAVWMANRNQPVNGNFSKLSLLESGDLILTDAGRFIVWTIKRVGISPVQLHLFNTGNLVLRTSDGVIQWQSFDSPTDTLLPHQPLTRNTRLVSSRTKTNFFSGFYKFYFDNNNVLILVFDGPDASGIYWPPSWLVSWQAGRSAYNSSRTALLDYFGYFSSTDDLKFQSSDFGERVQRRLTLDIDGNLRLYSFEEGRNKWVVTWQAITLQCNIHGICGPNSICTYVPGSGSGRRCSCIPGYEMKNRTDRTYGCIPKFNLSCDSQKVGFLLLTHFEFYGYDYGYYPNYTLQMCEKLCLEICGCMGFQYSYTSDNYKCYPKRLLLNGYRSPGFLGHIYLKLPKAKQLVRSYAKAHENEVLKFILWFACAIGAVEMVCICMVWCFLMKAQQNTSTDPPGYILAATGFRKFTYTELKKATRGFSEEIGRGGGGVVYKGVLSDHRVAAIKQLSGANQGESEFLAEVSTIGRLNHMNLIEMWGYCFEGKHRLLVYEYMEHGSLAQNLTSNTLDWQKRFDIAVGTAKGLAYLHEECLEWVLHCDVKPQNILLDVNYQPKVADFGLSKLQNRGEINNSRLSRIRGTRGYMAPEWVLNLPITSKVDVYSYGIVVLEMVTGRRSASMAIHGTDGIGERQSLVAWVKGKMNGATAVASWMKEILDPSMEGEYDMGEMEILVAVALQCVELDKDERPTMSQVVETLLRPERGNNLHYY* 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0785 780 Pfam Protein kinase domain 494 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi18g0785 780 Gene3D - 20 149 IPR036426 -
Vvi18g0785 780 SUPERFAMILY alpha-D-mannose-specific plant lectins 59 193 IPR036426 -
Vvi18g0785 780 ProSiteProfiles Protein kinase domain profile. 491 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi18g0785 780 FunFam Serine/threonine-protein kinase 566 776 - -
Vvi18g0785 780 Pfam S-locus glycoprotein domain 244 318 IPR000858 GO:0048544
Vvi18g0785 780 SUPERFAMILY Protein kinase-like (PK-like) 467 768 IPR011009 -
Vvi18g0785 780 SMART serkin_6 491 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi18g0785 780 CDD PAN_AP_plant 331 414 - -
Vvi18g0785 780 CDD EGF 285 320 - -
Vvi18g0785 780 FunFam Putative receptor protein kinase ZmPK1 20 149 - -
Vvi18g0785 780 ProSitePatterns Protein kinases ATP-binding region signature. 497 519 IPR017441 GO:0005524
Vvi18g0785 780 Pfam D-mannose binding lectin 76 167 IPR001480 -
Vvi18g0785 780 CDD B_lectin 34 150 IPR001480 -
Vvi18g0785 780 PIRSF SRK 1 777 IPR024171 GO:0004674
Vvi18g0785 780 PANTHER OS07G0415500 PROTEIN 6 769 - -
Vvi18g0785 780 Gene3D Phosphorylase Kinase; domain 1 457 565 - -
Vvi18g0785 780 ProSitePatterns Serine/Threonine protein kinases active-site signature. 607 619 IPR008271 GO:0004672|GO:0006468
Vvi18g0785 780 SMART blect_4 32 150 IPR001480 -
Vvi18g0785 780 Gene3D Transferase(Phosphotransferase) domain 1 566 777 - -
Vvi18g0785 780 ProSiteProfiles Bulb-type lectin domain profile. 23 148 IPR001480 -
Vvi18g0785 780 FunFam S-receptor-like serine/threonine-protein kinase 459 565 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0785 Vvi-Chr18 8151295 8153700 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0785 481 768 Trihelix Transcription Factor Family AT5G38560 42.177 2.48e-67 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Vvi18g0785 Pkinase 9.8e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0785 - - vvi:100247193 1528.07