Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0776 ATGGGCAACTTGTACCATTATGCTGTGATCTTGTTGCCAATCATCCTGATCATCAAATTCTTATTCCATGGAAGGCAGAGGCAGAGGTATAGACTGCCGCCAAGTCCATTTGCACTTCCAGTAATAGGCCACCTCCACCTCCTCAAGCCGCCGCTCTACCAAGGCCTACAGGCTCTCTCATCCCAATACGGTCCCATCCTCTTTCTCCGATTCGGTTGCCGTCCGTTCGTCGTCGTATCCTCTCCTTCCGCTGTCCAAGAATGCTTCACCAAGAACGACGTTGTGTTGGCAAACCGGCCTCGGTCGATGATTGGGGATCACGTTACTTACAACTACACCGCCTTCGCCTGGGCTTCTTACGGCCATCTCTGGCGCGTCCTCCGCCGCCTCACCGTCGTTGAGATTTTATCTTCCAACAAACTCCTGCTCCTTTCAACCGTCCGTGAGGAAGAAGTCCGTTACCTTCTTCGTCAGCTGTTTAAAGTCTCAAACGACGGAGCCCAAAAGGTGGATATGAGGTTATATCTCTCTCTTTTCAGCTTTAATTTCATCATGAAAACGATTACTGGAAAGCGGTGTATCGAAGAGGAGGCTGAAGGAATAGAGACGAATAGGCAATTTCTTGAACGATTGAAGAGGATCTTCGTTCCCACCACTACCACGAATCTGTGTGATTTCTTTCCAATTTTGAGGTGGGTGGGTTACAAAGGGCTGGAGAAGAGTGTAATACAGTTTGGGAAGGAGAGAGATGGGTACTTGCAGGGCATGTTAGATGAGTTCCGACGAAACAATAGCGCAGTGGAGTGGCAAAAGAAGAGGACATTGATCGAAACCCTCTTGTTCCTCCAACAATCAGAGCCCGATTTCTACACGGATGACGTCATCAAAGGTCTGATGCTGGTAGTGATTTCTGCGGGAACGGATACATCATCAGTGACCCTGGAATGGGCAATGTCTCTTCTGCTGAATCATCCAGAGGCATTGGAGAAGGCGAGAGCGGAAATTGACAGCCATGTCAAACCGGGACACTTGCTAGATGACTCGGATCTTGCCAAGCTTCCATATCTCCGCAGTGTGGTCAATGAGACGCTTAGACTTTATCCCACGGCTCCTCTTCTGTTGCCTCATCTGTCATCTGAAGATTGCAGTGTGGGTGGATTTGATATTCCGCGGGGTACCACCGTGATGGTGAATGTTTGGGCATTGCACAGGGATCCCAGGGTGTGGGAGGAGGCAACCAAGTTCAAGCCAGAGAGATTCGAAGGAATGGAGAATGAGGAAAAAGAAGCGTTCAAATTCGCTCCATTTGGTATAGGAAGGAGGGCATGTCCAGGAGCTGCCTTAGCTATGAAGATAGTTTCACTGGCATTAGGTGGGCTCATACAGTGCTTTGAGTGGGAAAGGGTGGAGGCAGAGAAGGTGGACATGAGCCCAGGCTCGGGAATTACCATGCCCAAGGCTAAGCCTTTGGAGATCATCTTTCGGCCCCGCCCCACCATGACTAGCCTCCTTTCTCAACTTTGA 1524 0.4987 MGNLYHYAVILLPIILIIKFLFHGRQRQRYRLPPSPFALPVIGHLHLLKPPLYQGLQALSSQYGPILFLRFGCRPFVVVSSPSAVQECFTKNDVVLANRPRSMIGDHVTYNYTAFAWASYGHLWRVLRRLTVVEILSSNKLLLLSTVREEEVRYLLRQLFKVSNDGAQKVDMRLYLSLFSFNFIMKTITGKRCIEEEAEGIETNRQFLERLKRIFVPTTTTNLCDFFPILRWVGYKGLEKSVIQFGKERDGYLQGMLDEFRRNNSAVEWQKKRTLIETLLFLQQSEPDFYTDDVIKGLMLVVISAGTDTSSVTLEWAMSLLLNHPEALEKARAEIDSHVKPGHLLDDSDLAKLPYLRSVVNETLRLYPTAPLLLPHLSSEDCSVGGFDIPRGTTVMVNVWALHRDPRVWEEATKFKPERFEGMENEEKEAFKFAPFGIGRRACPGAALAMKIVSLALGGLIQCFEWERVEAEKVDMSPGSGITMPKAKPLEIIFRPRPTMTSLLSQL* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0776 507 CDD CYP81 64 490 - -
Vvi18g0776 507 Gene3D Cytochrome P450 19 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0776 507 Pfam Cytochrome P450 33 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0776 507 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0776 507 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0776 507 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0776 507 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0776 507 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0776 507 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0776 507 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0776 507 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0776 507 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0776 507 PRINTS P450 superfamily signature 443 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0776 507 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0776 507 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0776 507 SUPERFAMILY Cytochrome P450 33 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0776 507 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
Vvi18g0776 507 Coils Coil 191 211 - -
Vvi18g0776 507 PANTHER CYTOCHROME P450 82C3-RELATED 11 497 - -
Vvi18g0776 507 FunFam Cytochrome P450 family protein 23 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0776 Vvi-Chr18 8045718 8048970 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0776 16 507 Cytochrome P450 AT5G10600 49.393 9.35e-180 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0776 - - vvi:100255729 1015.76