Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0763 ATGCCAACTACTGATCCTTTTATTGCAAATTTGCAAACATGGTATGCTGTTGCTAGGCTATCAACCATGGTGAACAGGGGTTACTATCCTTCAAGGGTGGCTGATGCTTACTCCAAGTACATCAACTTTCAGGCCATCAGTACATCCATGGACACCTCTTATTGCTACATTCTGCTCTTCCTCTTCATATACTTTCTTACCAAGCACTTTTTCCAATCCAACAAAAAACTCCCACCAAGTCCTCCTCTCTCCCTACCCATAATAGGTCATCTCCACCTCTTCAAGAAACCCCTTCATCGCACCTTTGCTAAAATTTCTAACCAATATGGTCCAATCCTGTTCATCAGATTTGGCTCTCGCCCTGTCATCATTGTGTCTTCCCCCTCTGCCGCGGAGGAATGCTTCACCAAAAACGACATTGTTTTTGCAAACCGCCCCCGCCTACTGGCTGGAAAACACCTGGGTTACAATTACACCACTCTTACCTGGGCACCATATGGTCAACATTGGCGCAATTTAAGGCGTATAGCTTCCCTGGAGATATTGTCATCCAATAGGCTTCAGATGTTCTATGACATCCGGATTGATGAGGTCCGGGCACTACTTTGCCAGCTCTTCAGAGCCTCCAGTGAAGGTCAATTTTCTGCTGTGGATATGAAATCCATGTTTTTTGAGCTGACACTTAACAATATGATGAGAATGATCTCAGGAAAGAGGTACTACGGTGACAATGTTACAGAATTGGAGGAAACAAGAAAGTTTCGGGAGATAGTGGCAGAGACCTTTGAGTTGAGTGGGGCAACCAATATTGTAGATTTTGTACCATTCTCGAAGTGGATTGGATTAAATGGAATCGAAAAGAAGTTGGTGATATTGCAGGGGAAAAGAGATGGATTCATGCAGAATTTGATTGAAGAGCACAGAAGAATGAGAAGTCCTTGTGAAGGGAGGAGCAAGACTATGCTTGATGTCCTATTATCATTGCAAGAAACTGAACCTGAATGCTATACAGATGACATCATTAGAGGCATGATGCAAGTCATGTTATCAGCAGGAACCGACACTTCAGCTGGGACAATGGAGTGGGCAATGTCACTTTTGCTGAACAATCCAGAAGCCCTTGAGAAAGCCCAGGCTGAAATAGACTCCCACTTGGGAAAAAGCAGGCTGATTGATGAATTAGATATAGCAGAGCTTCCCTATCTCCGTGGCATTATTAAGGAGACACTCCGAATGTACCCAGCTGCTCCACTGCTAGTACCCCACGAGTCATCCGAGGAGTGCACTGTGGGGGGTTTCAGAGTCCCAAGTGGTACAATGCTGTTGGTGAACATGTGGGCTATACAAAATGATCCTATGTTATGGGCAGAGCCTTCAAAATTTAAGCCAGAGAGATTCCAAGGTCCAGAGGGACAAAGAAATGGATTCATGTTTTCGCCTTTTGGGGCTGGGAGGAGGGGGTGCCCCGGGGAAGGATTGGCAATGCGGGTGGTTGGGTTGGCCTTAGGCTCACTGATTCAGTTCTTCGAGTGGGAGAGAGTTGATGAGGAGATGGTGGACATGAGCGAAGGAACAGGGCTCACCATGCCCAAAGCTCAGTCCTTGGTGGCTAAGTGTAGACCACGACCATCCATGGTGAGCCTCCTTTCTCAACTTTAG 1659 0.4617 MPTTDPFIANLQTWYAVARLSTMVNRGYYPSRVADAYSKYINFQAISTSMDTSYCYILLFLFIYFLTKHFFQSNKKLPPSPPLSLPIIGHLHLFKKPLHRTFAKISNQYGPILFIRFGSRPVIIVSSPSAAEECFTKNDIVFANRPRLLAGKHLGYNYTTLTWAPYGQHWRNLRRIASLEILSSNRLQMFYDIRIDEVRALLCQLFRASSEGQFSAVDMKSMFFELTLNNMMRMISGKRYYGDNVTELEETRKFREIVAETFELSGATNIVDFVPFSKWIGLNGIEKKLVILQGKRDGFMQNLIEEHRRMRSPCEGRSKTMLDVLLSLQETEPECYTDDIIRGMMQVMLSAGTDTSAGTMEWAMSLLLNNPEALEKAQAEIDSHLGKSRLIDELDIAELPYLRGIIKETLRMYPAAPLLVPHESSEECTVGGFRVPSGTMLLVNMWAIQNDPMLWAEPSKFKPERFQGPEGQRNGFMFSPFGAGRRGCPGEGLAMRVVGLALGSLIQFFEWERVDEEMVDMSEGTGLTMPKAQSLVAKCRPRPSMVSLLSQL* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0763 552 Gene3D Cytochrome P450 68 546 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0763 552 Pfam Cytochrome P450 79 531 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0763 552 SUPERFAMILY Cytochrome P450 78 542 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0763 552 PANTHER CYTOCHROME P450 82C3-RELATED 57 544 - -
Vvi18g0763 552 FunFam Cytochrome P450 family protein 70 545 - -
Vvi18g0763 552 PRINTS E-class P450 group I signature 340 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0763 552 PRINTS E-class P450 group I signature 106 125 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0763 552 PRINTS E-class P450 group I signature 403 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0763 552 PRINTS E-class P450 group I signature 360 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0763 552 PRINTS E-class P450 group I signature 130 151 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0763 552 PRINTS E-class P450 group I signature 226 244 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0763 552 PRINTS E-class P450 group I signature 478 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0763 552 PRINTS E-class P450 group I signature 444 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0763 552 PRINTS E-class P450 group I signature 488 511 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0763 552 CDD CYP81 110 535 - -
Vvi18g0763 552 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 481 490 IPR017972 GO:0005506|GO:0016705
Vvi18g0763 552 PRINTS P450 superfamily signature 351 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0763 552 PRINTS P450 superfamily signature 488 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0763 552 PRINTS P450 superfamily signature 479 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0763 552 PRINTS P450 superfamily signature 404 415 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0763 Vvi-Chr18 7959549 7961665 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0763 53 551 Cytochrome P450 AT4G37370 50.699 3.78e-179 512
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0763 - - vvi:100243685 1087.79