Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0762 ATGGAGATGCTGTACTTCTATATCCCACTTTTCTTTGTCTTGTATGTCTTCACATCGCACTTCCTTCACAAGTTCCGCAATCTCCCACCAAGTCCCTTCCCCACTTTGCCCTTGATCGGCCATCTCTATCTCCTTAAGAAACCGCTGCACCGAACCTTATCCAAAATTTCGGACCGCCACGGCCCCATACTCTTCCTTCGATTCGGTTCCCGGCCTGTACTCCTTGTTTCCTCACCTTCAGCCTCTGAGGAATGTTTCACCAAGAACGACGTCGTTTTTGCCAACCGCCCTCGCCTGATCGCCGGCAAACACCTAGGTTACAACTATACATCCATGAGCTGGGCCCCCCACGGCGACCATTGGCGAAATCTCCGGCGAATTTCCTCTTTCGAGATTCTATCATCCAATCGTCTTCAGACGCTTTCCGGCATTCGCTCCGATGAAGTCCGATCTCTGGTTCGCTGGCTTTTTAAGAATCAAAGTCAGATGGTGGAAATGAAATCTGCGTTCTTCGAGATGACACTTAATGTGATGATGAAGATGATCGGCGGAAAGCGGTATTATGGTGAGAATATCGGGGAGGTGGAGGAGGCTAGGATGTTTCGAGAGATGGTGTCGGAGACGTTCCAGTTAGCAGGTGCGACGAATATGGTAGATTTCTTACCAATTTTGGGCTGGCTAGGGTTGAAAGGGACAGAGAGGAGGTTGATTAAGTTGCAAAAAAGGCGAGAGAGCTTCATACAGAATTTGATAGAAGAGCACAGAAGGAAGGGAAGTAACTGCGAAGGGAGGCAGAAGACGATGATTGAAGTTCTGTTATCGCTGCAAGAGACAGAGCCTGAGTACTATACAGACGAGATCATCAGAGGCCTCATGCTATCTATGTTGACCGGAGGAACAGATACCTCGGCTGGGACCATGGAATGGGCATTGTCGCTTTTGCTGAACAATCCAAAAGTCCTTAAGAAGGCACATCAAGAGATTGACGACCGCTTGGGACATGATCGTCTGATTGAGGAACTGGACCTAGCCCAGCTTCCTTATCTCCGAAGCATCATTAAGGAGACACTGCGTATGTATCCGGCAGGCCCATTGCTAGTCCCTCATGAGTCGTCAAAGGAGTGCTCTGTAGGAGGGTTTCGCATCCCACAAGGCACCATGCTGCTTGTTAATCTGTGGGCTATACAAAGTGACCACAAAATTTGGGGTGATCCCACAGAATTCAGGCCAGAGAGATTCGAGGGTGTAGAAGGGGATCGAGATGGGTTCAAGTTTGTTCCTTTTGGGTCAGGGAGACGAGGTTGTCCAGGGGAGGCCCTAGCCATCCGCATAGTTGGGCTGGCCTTGGGTTCTCTCATTCAGTGCTTTGATTGGGAGAGGGTTGATGAGCAGATGGTGGACATGACTGAGGGGGGTGGTCTCACTCTGCCTAAGGCTCAGCCTTTACTGGCGAAGTGTCGGCCTCGTCCAACCATGGTCAACCTCTTTTCCCAACTCTGA 1500 0.5013 MEMLYFYIPLFFVLYVFTSHFLHKFRNLPPSPFPTLPLIGHLYLLKKPLHRTLSKISDRHGPILFLRFGSRPVLLVSSPSASEECFTKNDVVFANRPRLIAGKHLGYNYTSMSWAPHGDHWRNLRRISSFEILSSNRLQTLSGIRSDEVRSLVRWLFKNQSQMVEMKSAFFEMTLNVMMKMIGGKRYYGENIGEVEEARMFREMVSETFQLAGATNMVDFLPILGWLGLKGTERRLIKLQKRRESFIQNLIEEHRRKGSNCEGRQKTMIEVLLSLQETEPEYYTDEIIRGLMLSMLTGGTDTSAGTMEWALSLLLNNPKVLKKAHQEIDDRLGHDRLIEELDLAQLPYLRSIIKETLRMYPAGPLLVPHESSKECSVGGFRIPQGTMLLVNLWAIQSDHKIWGDPTEFRPERFEGVEGDRDGFKFVPFGSGRRGCPGEALAIRIVGLALGSLIQCFDWERVDEQMVDMTEGGGLTLPKAQPLLAKCRPRPTMVNLFSQL* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0762 499 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0762 499 PRINTS P450 superfamily signature 426 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0762 499 PRINTS P450 superfamily signature 351 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0762 499 PRINTS P450 superfamily signature 435 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0762 499 PANTHER CYTOCHROME P450 82C3-RELATED 6 489 - -
Vvi18g0762 499 SUPERFAMILY Cytochrome P450 29 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0762 499 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0762 499 PRINTS E-class P450 group I signature 350 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0762 499 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0762 499 PRINTS E-class P450 group I signature 391 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0762 499 PRINTS E-class P450 group I signature 425 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0762 499 PRINTS E-class P450 group I signature 81 102 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0762 499 PRINTS E-class P450 group I signature 173 191 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0762 499 PRINTS E-class P450 group I signature 57 76 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0762 499 PRINTS E-class P450 group I signature 435 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0762 499 CDD CYP81 61 482 - -
Vvi18g0762 499 Pfam Cytochrome P450 30 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0762 499 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 428 437 IPR017972 GO:0005506|GO:0016705
Vvi18g0762 499 Gene3D Cytochrome P450 23 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0762 499 Coils Coil 229 249 - -
Vvi18g0762 499 FunFam Cytochrome P450 family protein 21 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0762 Vvi-Chr18 7956240 7958165 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0762 27 498 Cytochrome P450 AT4G37340 53.138 1.61e-178 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0762 - - vvi:100267741 1011.91