Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0761 ATGGAGATGCTGTACCTCTGTATCCCAATTTTCTTAGCCTTGTATGTCTTCACATGGCACTTCCTTCACAAGCTCCACAATCTCCCACCAAGCCCATTTCCCATTTTGCCCTTGATCGGCCATCTCTATCTCCTTAAGAAACCGCTGCACCGAAACTTATCCAAAATTTCGGACCGCCATGGCCCCATACTCTTCTTGCGATTCGGTTACCGGCCTGTGCTCATTGTTTCCTCACATTCAGCTGCTGAGGAATGTTTCACCAAGAACGACATCATTTTTGCCAACCGCCCCCGCCTGATCGCCGGCAAACACCTAGGTTACAACTATACGGCCATCGGCACAGCTCCCTACGGCGACCATTGGCGAAATCTCCGGCGAATCTCCTCTTTCGAGATTCTATCATCCAATCGTCTTCAGATGCTTTCCGGCATTCGCTCCGATGAGGTCCGAACGCTGATTTGCCGGCTTGTTAAGAATCAAAATCAGGTGGTGGAGATGAAATCCGCGTTCTTCGAGCTGACGCTTAATGTGATAATGAGGATGATCGGCGGAAAGCGGTATTACGGTGAGAATGTTGGGGAGGTGGAGGAGGCTAGGAAATTTCGAGAGATGGTGTCGAAGGCGTTCCGGTTGGCAGGTACGAATATGGTAGATTTCTTGCCAATTTTGGGGTGGTTAGGGTTGAAAGGGACAGAGAAGAGGTTGATGGAGCTGCAAAAAATGAGAGACAGCTTCATACAGAATTTGATAGAAGAGCACAGAATCAAGGGGAGTAAGTGTGAAAGAAGGCCGAAGACGATGATTGAAGTTCTGTTATCACTGCAAGAGACAGAGCCTGAGAACTATACAGACGAGATCATCGGAGGCCTCATGCTATCTATGTTAACCGCAGGAACAGATACTTCAGCCGGGACCATGGAATGGGCACTGTCGCTTTTGCTGAACAGTCCAGAAGTGCTTAAGAAGGCGCAGCAAGAGATTGACGTCCATTTGGGACATGATCGTCTGATTGAGGAAGTGGATCTAGCCCAGCTTCCTTATCTTCGGAGCATTATTAAGGAGACGCTGCGTATGTACCCAGCAGGTCCATTGCTAATCCCTCACGAGTCCTCAAAGGAGTGCTTTGTAGGAGGGTTTCGCATCCCACCAGGCACCATGCTGCTTGTTAATGTGTGGGCTATACATAATGACCCCAAAATTTGGGCTGAGCCCACAAAATTCAAACCAGAGAGATTTGAGGGTGAAGAAGGGGAGCGAGATGGGCTCAGGTTTTTGCCCTTTGGATCAGGGAGAAGAGGTTGTCCTGGGGAGGGCCTAGCCATCCGCATGGTGGGCTTGGCCATGGGTTCACTTATTCAGTGCTTTGATTGGGAGAGGGTTGATCAACAGATGGTGGACATGACAGAAGGGCACGGTCTCAGTATTCCTAAGGCTCAGCCTTTACTGGCCAAGTGTCGGCCTCGCCCAACCATGGTCAACCTCCTTTCCCAACTCTGA 1497 0.4983 MEMLYLCIPIFLALYVFTWHFLHKLHNLPPSPFPILPLIGHLYLLKKPLHRNLSKISDRHGPILFLRFGYRPVLIVSSHSAAEECFTKNDIIFANRPRLIAGKHLGYNYTAIGTAPYGDHWRNLRRISSFEILSSNRLQMLSGIRSDEVRTLICRLVKNQNQVVEMKSAFFELTLNVIMRMIGGKRYYGENVGEVEEARKFREMVSKAFRLAGTNMVDFLPILGWLGLKGTEKRLMELQKMRDSFIQNLIEEHRIKGSKCERRPKTMIEVLLSLQETEPENYTDEIIGGLMLSMLTAGTDTSAGTMEWALSLLLNSPEVLKKAQQEIDVHLGHDRLIEEVDLAQLPYLRSIIKETLRMYPAGPLLIPHESSKECFVGGFRIPPGTMLLVNVWAIHNDPKIWAEPTKFKPERFEGEEGERDGLRFLPFGSGRRGCPGEGLAIRMVGLAMGSLIQCFDWERVDQQMVDMTEGHGLSIPKAQPLLAKCRPRPTMVNLLSQL* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0761 498 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 427 436 IPR017972 GO:0005506|GO:0016705
Vvi18g0761 498 FunFam Cytochrome P450 family protein 21 491 - -
Vvi18g0761 498 SUPERFAMILY Cytochrome P450 29 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0761 498 PRINTS P450 superfamily signature 434 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0761 498 PRINTS P450 superfamily signature 425 434 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0761 498 PRINTS P450 superfamily signature 350 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0761 498 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0761 498 PANTHER CYTOCHROME P450 82C3-RELATED 10 488 - -
Vvi18g0761 498 Coils Coil 228 248 - -
Vvi18g0761 498 Gene3D Cytochrome P450 23 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0761 498 PRINTS E-class P450 group I signature 349 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0761 498 PRINTS E-class P450 group I signature 81 102 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0761 498 PRINTS E-class P450 group I signature 390 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0761 498 PRINTS E-class P450 group I signature 286 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0761 498 PRINTS E-class P450 group I signature 306 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0761 498 PRINTS E-class P450 group I signature 424 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0761 498 PRINTS E-class P450 group I signature 57 76 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0761 498 PRINTS E-class P450 group I signature 434 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0761 498 PRINTS E-class P450 group I signature 173 191 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0761 498 CDD CYP81 61 481 - -
Vvi18g0761 498 Pfam Cytochrome P450 30 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0761 Vvi-Chr18 7943100 7953002 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0761 27 497 Cytochrome P450 AT4G37340 53.766 6.32e-177 504
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0761 - - vvi:100260792 978.393