Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0734 ATGGCTTCTGAGGATGCCCAGGATCATCGTATTGCTCGAATTTCTTCTGCGATTCGGGTCATCCCCGACTTTCCCAAACCAGGTATTATGTTTCAGGACATAACAACATTGCTTCTCGACCCTCAGGCTTTCAAGGACACTATCGATTTGTTTGTTGAGAGATACAAAGGGAAAAACATCTCTGTTGTTGCAGGTATTGAAGCAAGAGGTTTTATATTTGGTCCGCCAATTGCATTGGCCATTGGAGCAAAATTTGTCCCCATGAGAAAACCTAATAAATTGCCTGGGGCGGTTATTTCTCAAGAGTATGCATTGGAGTATGGAACAGACAAAATTGAGATGCATGTTGGGGCTGTACAAGCTGGAGAACGGGCCTTAGTCATAGATGATCTCATTGCAACTGGGGGAACGTTGTGTGCTGCAATCAACCTCCTTGAACGGGTTGAGGTGGATGTGGTTGAGTGTGCTTGTGTCATTGAATTACCAGAGCTAAAGGGTAGGGACCGATTAGGAGACAAACCACTGTTTGTCCTTGTAAGTGCAGCTTGA 549 0.4499 MASEDAQDHRIARISSAIRVIPDFPKPGIMFQDITTLLLDPQAFKDTIDLFVERYKGKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPNKLPGAVISQEYALEYGTDKIEMHVGAVQAGERALVIDDLIATGGTLCAAINLLERVEVDVVECACVIELPELKGRDRLGDKPLFVLVSAA* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0734 182 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 5 180 - -
Vvi18g0734 182 Hamap Adenine phosphoribosyltransferase [apt]. 14 181 IPR005764 GO:0003999|GO:0005737|GO:0006168
Vvi18g0734 182 Pfam Phosphoribosyl transferase domain 50 174 IPR000836 -
Vvi18g0734 182 Gene3D - 2 181 IPR029057 -
Vvi18g0734 182 SUPERFAMILY PRTase-like 16 177 IPR029057 -
Vvi18g0734 182 FunFam Adenine phosphoribosyltransferase 1 2 181 - -
Vvi18g0734 182 CDD PRTases_typeI 48 180 IPR000836 -
Vvi18g0734 182 NCBIfam adenine phosphoribosyltransferase 15 179 IPR005764 GO:0003999|GO:0005737|GO:0006168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0734 Vvi-Chr18 7723028 7729816 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0734 1 182 PRT Gene Family AT1G27450 80.769 1.31e-106 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0734 K00759 - vvi:100245536 347.051