Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0714 ATGGAGCCCAAAGAAGAGGATCCAACGCTCGCCAAGCTCCAATCAGCCTGTTCCGATCTGAAAAAACTGCTTCACAGCTCAGCCAGCATGGAAGCAAGTCTAGAAAAGATGGACAAAAATTTTGATACATTGCAAGAAACCCTTTCCACGGCTTCAAGAAGAGTAGGTCCTTTGCAGTCCTTGGCTATAGCTTCCAAAGCTCTCGACACCAGAATAAACCGGGCGGTTTCCCCGGCTCTCGCTCTTCTCGAAAGTTTCAAACTTGCGGAGTCTCTCCAACACAAGCTGCTTCAGCTCACCTCTGAATTATCGTCTAAGGACGCTCCCAAGAAGCGGCTCAAGGCACTGGTTAAGTATGTTGATTGTGTGGATAAACTCAATGCGGCCATCAATTCTATTAGTCTAGAGTGTGAGCCTGCGATTCAGAAGCTTCAAGAGGTGGTGGAGTTTTTGAGTAGGACCAGGGCGACTGATCAGTATAGGACGCATCGGCTGAGGGAGACTCTAATCACTCTTAAAGCGCTGTATGAAACAGAGGTGGATGCGATGAGATTTGATGGGTTGCTGGATGAAGCTTTGCTCAATTTGCAGGATGAGTATGAGCGTATACTGCAGCAGCTAAGGCATCGAAACATAGCTGAGTTGCAAGGAGATGCTCCGGCTGAGATGATGGCTTCTGATCTGGGTACTGAGCTGGAGGTTGAGGTTCTTAGACGGATTTCAGAAACTCTAGCTGCTAACGATTGTTTGGATATATGCATCGATATCTTTGTGAAGGTGAGGTATAGAAGGGCAGCAAAAGCCCTGATGAGACTGAACCCTGATTATCTAAGAACTTATACTCCCGAGGAAATTGACAACATGGAATGGGAGAGCTTGGAGACAGCAACAGCCCTTTGGATCCAACACTTCGAGCTTGCAGTTAAAACAGTCCTGGTGTCAGAAAAGAAACTCTGCAAGCAAGTTTTGTCAGGAATCATGGAGGGATTAATCTGGACAGAATGCTTCGTAAAGATTGCAGACAAGATCATGGCAGTCTTTTTCCGGTTCGGAGAGGGTGTAGCGAGGAGCAACAAGGAACCCCAGAAGCTGTTCAAGCTCTTAGACATGTTCGATTCATTGGAAAAGCTTAAAACCCAATTCTCAGAGATTTTCGAAGGTGAAGCTGGAGCTGACATCTGTTTGCGATTCCGAGAACTTACGAAGCTTCTCGTCCACTCTTCCAGCAAAGTATTTTGGGAGTTCGGCCTTCAAATTGAAGGCAATCAAGACGGGTTTCCGCCACTTCAAGACGGCTCAGTTCCAAAACTCGTCCGATACGCCATTAATTACCTTAAGTACCTGACCACCGAGAATTACAGTGCTCCCATGGCAAAGGTTCTTCGAACGGAGCAAATATGGAAAGCCGGCGTTTTATCTCAACCTGAAACAGATGAGAACTTACTCAAAGACGCCATTTCCAGCGTAATGGAAGCTATTCAGAGGAACGTGGAGTCGAAAAAATCCCGATGCCGAGACAAAATTCTTTCCCATGTCTTCGCCATGAACACGTACTGGTACATTTACATGAGAAGCAGAAGTTCAGAGCTGGGGAAGCTTTTAGGAGAGCAGTGGATGAAGAAGAAGTACAAGATCATTGCGGAAGAATCGGCATACATGTACCAGAAACAGGCTTGGGGAACTCTAGTGAATTTGCTGGAGAAAGAAGAATCGAACAGACAGACAAACAAAGAATCCATGGGAGCTGTGATAAGAGGGAAGATGGAAGCATTTCTAGAGGGTCTTGATGAAATCTCCAAAAGACATAGAACCTCTTATACCATTCCTGATGCAGATTTGAGAATACAGCTGAGGGAGGCGTCCGTTAAGCTGGTAGTTACGGCTTATACCGAATTCTTAACCTCTTACTCCTATTTTTTGCAGCCAAAATCCTACCTTCCTCCCGACTCAATCCAGGCCATGCTGGGTCAACTTTTCAACGATGGCCATCGAGTCCCTAGACTTTCCAAGGATCGGATGGCTGGAGACAACTCGGCCGGTGAGATCAAAGATTTTTCACGGTCCAGATCAAACGCCAGTGATCAGTGA 2088 0.4631 MEPKEEDPTLAKLQSACSDLKKLLHSSASMEASLEKMDKNFDTLQETLSTASRRVGPLQSLAIASKALDTRINRAVSPALALLESFKLAESLQHKLLQLTSELSSKDAPKKRLKALVKYVDCVDKLNAAINSISLECEPAIQKLQEVVEFLSRTRATDQYRTHRLRETLITLKALYETEVDAMRFDGLLDEALLNLQDEYERILQQLRHRNIAELQGDAPAEMMASDLGTELEVEVLRRISETLAANDCLDICIDIFVKVRYRRAAKALMRLNPDYLRTYTPEEIDNMEWESLETATALWIQHFELAVKTVLVSEKKLCKQVLSGIMEGLIWTECFVKIADKIMAVFFRFGEGVARSNKEPQKLFKLLDMFDSLEKLKTQFSEIFEGEAGADICLRFRELTKLLVHSSSKVFWEFGLQIEGNQDGFPPLQDGSVPKLVRYAINYLKYLTTENYSAPMAKVLRTEQIWKAGVLSQPETDENLLKDAISSVMEAIQRNVESKKSRCRDKILSHVFAMNTYWYIYMRSRSSELGKLLGEQWMKKKYKIIAEESAYMYQKQAWGTLVNLLEKEESNRQTNKESMGAVIRGKMEAFLEGLDEISKRHRTSYTIPDADLRIQLREASVKLVVTAYTEFLTSYSYFLQPKSYLPPDSIQAMLGQLFNDGHRVPRLSKDRMAGDNSAGEIKDFSRSRSNASDQ* 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0714 695 PANTHER EXOCYST COMPLEX PROTEIN EXO70 84 659 IPR004140 GO:0000145|GO:0006887
Vvi18g0714 695 Gene3D Exocyst complex component Exo70 101 665 - -
Vvi18g0714 695 MobiDBLite consensus disorder prediction 667 695 - -
Vvi18g0714 695 SUPERFAMILY Cullin repeat-like 115 659 IPR016159 -
Vvi18g0714 695 Coils Coil 34 54 - -
Vvi18g0714 695 Pfam Exo70 exocyst complex subunit 300 655 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0714 Vvi-Chr18 7529283 7531698 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0714 7 637 EXO70 exocyst subunit family AT4G31540 30.015 2.93e-81 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0714 - - vvi:100267832 1355.5