Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0696 ATGGCCATGCTTTGTTCCATATTCCGTCAGTTTCTTTTTATTAATCTTGTTTTGCAGGTTAGTTCAGTGGTTGCAGCATCTCATTCGCCCGTGAAGTTTCTTCCAGGTTTTGAGGGGCCTCTCCCTTTTGAGCTGGAAACTGGGTATGTGGGAGTGGGTGAATCAGAGGAAGTGCAGTTATTCTACTACTTTGTAAAGTCGGAGAATAACCCGACGGAGGATCCTCTCCTGCTCTGGCTAACGGGAGGCCCCGGTTGCTCTGCCTTCTCTGCTCTATTCTATGAAATAGGTCCACTGTACTTCGAGTCAGTACCGTACCATGGGAGCTTGCCCACGTTGGAACTGAACCCACACTCGTGGACACAGGTATCCAACATAATATTTTTGGATGCGCCTGTCGGCACTGGATTCTCCTATGCAACAACTTCTCGTGCTTCTCATTCAGGCGACTTTCAAGCAACTCATCAGGCACATGAGTTTCTTAGGAAGTGGCTGATTGATCATCCAGAATTCCTCTCAAATCCGGTCTATGTGGGGGGAGACTCCTACTCTGGGATTACCGTCCCTGTCGTGGTTCAACACATCTCGAATGGAAATGAAGATGATACTGAACCCTTCATCAATCTCAAGGGGTACTTGCTTGGAAACCCCGTAACAGAGCAAGGTACTGAAACAACCGCACAATTCCGATTTGCTCATGGAATGGCACTCATTTCTGATGAACTCTATGAGTCACTGAAGACAAGTTGTGGAGATGAATATCCGTTCAAGTATCCCATCAATATACAGTGTATAAAGGATGTTCAGGCTTTTTATAAGTGCATTTCAGGAATTCAATTTGGACAGATTTTAGAACCCGTGTGTGGTTTCGGTTCCCTAAAGCCGGAAGATATTTTCTTAAGTGGAAGAAGATATCTGATTGGGAAACTCAGAGAGCGCCGCCCAGAGCCATCACTTTCTGCATTTGAATGCCGTACTGATGGATACATCCTTGCTCCTTACTGGGCAAATAACGCCACTGTCCAAGAAGCGCTTCATATTAGAAAGAATACAATAAGAGAGTGGCAGAGATGCGCGATGGGATTATCTTATACGCCTGAAATTGAGAGCAGTTTTGAATATCATGTAACTCTAAGTAAAAAGGGTTACCGATCTCTAATATACAGTGGTGACCATGACATGATTGTGCCCTTCTTTTCAACTCAAGCATGGATAAGATCTCTGAACTACTCCATTGTTGATGACTGGAGATCATGGATGGTGGAAGGCCAAGTTGGAGGATATACGAGGACTTATTCCAACCAGATGACATTTGCGACTGTTAAGGGAGGAGGGCACACAGCACCAGAATACAGGCCTAAAGAGTGTTTTGGTATGTATAAAAGATGGGTATCTGGACAGCCTCTGTAA 1410 0.4489 MAMLCSIFRQFLFINLVLQVSSVVAASHSPVKFLPGFEGPLPFELETGYVGVGESEEVQLFYYFVKSENNPTEDPLLLWLTGGPGCSAFSALFYEIGPLYFESVPYHGSLPTLELNPHSWTQVSNIIFLDAPVGTGFSYATTSRASHSGDFQATHQAHEFLRKWLIDHPEFLSNPVYVGGDSYSGITVPVVVQHISNGNEDDTEPFINLKGYLLGNPVTEQGTETTAQFRFAHGMALISDELYESLKTSCGDEYPFKYPINIQCIKDVQAFYKCISGIQFGQILEPVCGFGSLKPEDIFLSGRRYLIGKLRERRPEPSLSAFECRTDGYILAPYWANNATVQEALHIRKNTIREWQRCAMGLSYTPEIESSFEYHVTLSKKGYRSLIYSGDHDMIVPFFSTQAWIRSLNYSIVDDWRSWMVEGQVGGYTRTYSNQMTFATVKGGGHTAPEYRPKECFGMYKRWVSGQPL* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0696 469 FunFam Serine carboxypeptidase-like 11 25 469 - -
Vvi18g0696 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 116 128 IPR001563 GO:0004185|GO:0006508
Vvi18g0696 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 436 449 IPR001563 GO:0004185|GO:0006508
Vvi18g0696 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 164 189 IPR001563 GO:0004185|GO:0006508
Vvi18g0696 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 129 139 IPR001563 GO:0004185|GO:0006508
Vvi18g0696 469 FunFam Carboxypeptidase 323 468 - -
Vvi18g0696 469 SUPERFAMILY alpha/beta-Hydrolases 31 468 IPR029058 -
Vvi18g0696 469 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 30 453 IPR001563 GO:0004185|GO:0006508
Vvi18g0696 469 Gene3D alpha/beta hydrolase 37 468 IPR029058 -
Vvi18g0696 469 Pfam Serine carboxypeptidase 35 466 IPR001563 GO:0004185|GO:0006508
Vvi18g0696 469 FunFam Carboxypeptidase 372 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0696 Vvi-Chr18 7333968 7337109 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0696 25 54 Calmodulin-binding Proteins AT2G22960 76.667 2.40e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0696 K16296 - vvi:100255717 967.992