Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0670 ATGACGATTTTGGCCTCTGCCGACCGGAAGTGCCGCCGGAGCCCCAGAGCACCCCTCCTCCCCCAAAAGTACGATGATGCCGATTCCTTTGAGGTTGGCTTCTCCGGCGCCTCTTTCTCGGGCGCTGTCTTCAATCTCTCCACCACCGTAGTTGGGGCAGGGATCATGGCTCTTCCCGCCACCATTAAGCAATTAGGGATGATTCCGGGCTTGATCATGATTCTATTGGGTGCGCTATTGACCGAATCCTCTATCGAAATGATTTTGAGATTCAGTCGTGCTTCCAAGTCCTCCTCCTATTCCGGTGTTGTCGGTGATGCTTTCGGTGGCGTTGGCCGGACGGTTTTGCAGATTTGCGTCGTTGTTAATAATATGGGGATGCTCATCGTCTACATGATCATCATCGGCGATGTGCTATCGGGAACATGGTTGGACAAGGTTCACCATTTGGGCGTGGTGGAGGAATGGTTTGGTCAACATTGGTGGAGCACACGCTCCTTCTTGTTGCTTCTAACAACTCTCCTTGTTTTGACTCCGCTTATATCATTCAAGCGTGTTGATTCATTGAGATACACATCAGCTTTGTCTGTCGCTTTGGCTGTTGTTTTTGTGGCAATCACTGCTGGAGTAGCTATCGTCAAATTGGTGGAGGGAAGTATTGGAATGCCACGTCTACTGCCTGAAATTGTCGATCAGGCTTCATTCTGGAAGCTTTTCACGACTGTTCCTGTTCTGGTCACTGCCTATATATGCCATCACAACATTCACCCAATTGAGAAAGAGCTCCACGACCAAACTCAGATGAAACCTATTGTGCGGACATCCCTTATGTTGTGCACATCAGTCTATATTGCTACCAGCTTCTTTGGATTTCTTCTTTTTGGGGACCGAACGCTTGATGATGTGCTGGCCAATTTTGATGGTGATCTTGGGATCCCATATAGTTCATTGCTTAATGATGTGGTGAGGGTGAGCTATGCCATCCACTTGATGCTAGTGTTTCCAATCGTTTTCTTCTCCCTTCGCCTCAACCTAGATGGTCTTCTCTTTCCATATGCCATCCCCATTGCCTTTGATAGCCGGAGATTCTTCTCACTTACTGCTGCTCTCATGGGTTTTATCTTTTTGGGTGCTAATTTCGTGCCTAGCATTTGGGATGCCTTTCAGTTCACTGGTGCCACAGCTGCTGTTGCTGTTGGGTTCATCTTTCCAGCTGCTATAGCCCTTAGGGACACTCATGGAATCGCAACAAAGAATGACAGACTGGTATCATGTGTGATGATCCTCTTGGCTGTGTCAGCCAGCACGGTTGCCATCTCCAGTGACATTTATAGCATTTTCAATAGATGA 1350 0.4793 MTILASADRKCRRSPRAPLLPQKYDDADSFEVGFSGASFSGAVFNLSTTVVGAGIMALPATIKQLGMIPGLIMILLGALLTESSIEMILRFSRASKSSSYSGVVGDAFGGVGRTVLQICVVVNNMGMLIVYMIIIGDVLSGTWLDKVHHLGVVEEWFGQHWWSTRSFLLLLTTLLVLTPLISFKRVDSLRYTSALSVALAVVFVAITAGVAIVKLVEGSIGMPRLLPEIVDQASFWKLFTTVPVLVTAYICHHNIHPIEKELHDQTQMKPIVRTSLMLCTSVYIATSFFGFLLFGDRTLDDVLANFDGDLGIPYSSLLNDVVRVSYAIHLMLVFPIVFFSLRLNLDGLLFPYAIPIAFDSRRFFSLTAALMGFIFLGANFVPSIWDAFQFTGATAAVAVGFIFPAAIALRDTHGIATKNDRLVSCVMILLAVSASTVAISSDIYSIFNR* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0670 449 Pfam Transmembrane amino acid transporter protein 37 432 IPR013057 -
Vvi18g0670 449 PANTHER AMINO ACID TRANSPORTER 34 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0670 Vvi-Chr18 7015535 7020869 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0670 11 449 Amino Acid or Auxin Permease AAAP Family AT3G30390 62.187 0.0 564
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0670 K14207 - vvi:100264342 828.165