Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0635 ATGGCGGTCCCTGGGGGCCATCGGCAGCGAGGCAGGCCTCGAGCTCTGATCGGGGAACCAGTCCGACCCAGGGTTCCACTGAGGCGGTTGCTGAGAGTGGCATCGGTGGCCTGTGGAATACAGTTTGGTTGGGCTCTGCAGCTCTCCCTTCTCACGCCCTACGTGCAAGAGCTCGGAATTCCTCACGCCTGGTCCAGTATCATATGGCTTTGCGGTCCCCTCTCGGGTCTGCTGGTCCAGCCCCTCGTCGGACACCTCAGTGATCGCTGTAACAGCCGCTTTGGCCGCCGGAGGCCTTTCATCGTCGCCGGAGCTACGTCGATTGTCGTCGCCGTTCTGATAATCGGATTCTCGGCTGACATCGGGGGTTTGCTTGGTGACGGTGCCGACCGGAGGCCGAGGGCGGTGGCTACCTTTGTGGTAGGGTTTTGGTTATTGGATGTGGCTAATAACGTGACTCAAGGACCTTGTAGAGCTCTGCTAGCAGATCTGACCGAAAAGGATCATCGAAGGACAAGAGTGGCCAACGCGTATTTCTCACTATTCATTGCTGTCGGCAATGTCCTTGGCTTTGCTACCGGATCCTACAGTGGTTGGTTCAGGATTTTCTGGTTCACGAGCACCTCTTCATGTAATGCTGATTGTGCCAATCTCAAGTCTGCCTTTTTACTAGACATTATTTTTATTGCTATCACCACATATATAAGCATAACAGCAGCCCAGGAATTGCCTCTAAGTTCCAGCAGTCGATCCACTCACATTTCAGAAGAAATGGCAGAGTCAACCCATGCTCAAGAAGCTTTTCTTTGGGAACTATTTGGGACTCTTAGATATCTCTCAGGGTCTATTTGGATAATCCTGTTTGTAACTGCTTTGACTTGGATTGGATGGTTTCCTTTTCTTCTTTTTGATACTGATTGGATGGGTCGAGAAATTTATGGTGGCAAACCAAATGAAGGGCAGAATTATAATACTGGAGTTAGAATGGGTGCGCTCGGTCTGATGTTGAATTCAGTTGTTCTTGGAATAACTTCAGTGCTCATGGAGAAGCTCTGCAGGAAGTGGGGGGCTGGTTTTGTTTGGGGGCTATCAAATATTCTCATGTCTCTTTGCTTTCTATTAATGCTCATACTTTCTGCTGTGGTGAAACATATGGATTTTCTAGGTCATGATCTACCCCCAAGTGGTGTTGTGATTGCTGCACTGATTGTTTTTTCAATCCTTGGTATTCCATTGGCAATCACATATAGTGTTCCATATGCCTTGATATCCACACGAATTGAGTCCCTGGGACTAGGTCAAGGGTTATCAATGGGTGTTCTGAATTTGGCAATTGTAATTCCCCAGGTTATTGTGTCCCTAGGAAGTGGACCATGGGATCAACTTTTTGGTGGTGGCAACTCGCCATCCTTGGCTGTGGCAGCAGTTGCAGCATTCGCCAGTGGACTTGTAGCCATCTTGGCTATTCCTCGATCTAGTGCTGATAAATCCAGGGTCCACACATGA 1506 0.49 MAVPGGHRQRGRPRALIGEPVRPRVPLRRLLRVASVACGIQFGWALQLSLLTPYVQELGIPHAWSSIIWLCGPLSGLLVQPLVGHLSDRCNSRFGRRRPFIVAGATSIVVAVLIIGFSADIGGLLGDGADRRPRAVATFVVGFWLLDVANNVTQGPCRALLADLTEKDHRRTRVANAYFSLFIAVGNVLGFATGSYSGWFRIFWFTSTSSCNADCANLKSAFLLDIIFIAITTYISITAAQELPLSSSSRSTHISEEMAESTHAQEAFLWELFGTLRYLSGSIWIILFVTALTWIGWFPFLLFDTDWMGREIYGGKPNEGQNYNTGVRMGALGLMLNSVVLGITSVLMEKLCRKWGAGFVWGLSNILMSLCFLLMLILSAVVKHMDFLGHDLPPSGVVIAALIVFSILGIPLAITYSVPYALISTRIESLGLGQGLSMGVLNLAIVIPQVIVSLGSGPWDQLFGGGNSPSLAVAAVAAFASGLVAILAIPRSSADKSRVHT* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0635 501 NCBIfam sucrose/proton symporter 25 494 IPR005989 GO:0005886|GO:0008515|GO:0015770
Vvi18g0635 501 SUPERFAMILY MFS general substrate transporter 28 491 IPR036259 -
Vvi18g0635 501 CDD MFS_SLC45_SUC 30 487 - -
Vvi18g0635 501 Gene3D MFS general substrate transporter like domains 27 488 IPR036259 -
Vvi18g0635 501 FunFam Sucrose transport protein 24 489 - -
Vvi18g0635 501 Pfam MFS/sugar transport protein 43 288 - -
Vvi18g0635 501 PANTHER SUGAR TRANSPORTER 26 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0635 Vvi-Chr18 6694803 6703166 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0635 19 496 Sucrose Transporter Gene Family AT1G09960 71.816 0.0 692
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0635 K15378 - vvi:100232844 930.628