Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0597 ATGGCCCCAAAGGAATGCGAGTCTTTGATGTCTTCATACAAGAAGAGAAGGCAAGAAAAACTTGATATCTATTCTATTGTCAGAGCCAATAAGCCATTACAGTTGGTAGATGTCAGAGTTTCTGTGACCAAAGATGGGATGATTACAGTGAGTTTTGAAGGAGTTCATGGAAGCCCAGTGATCAATGGGATATGTATTCGGCGGGCACCACCATTAGCTGCATCCGAAGTGAAACATGGGTCTATTGCATGCAACAACTGTGCTGCAGAGATAGAATTATCTTCAGCTCAGAGCAAACTCATCAGAATGAAGTTTGCAGCCAAGTATGAAAAGAAAATAGAAGAGCTGAGTGGCCAATGTCAGCTCAAGTCAGACGAATGCTATGAGGCCTGGATGTCATTGACAGCTGCAAATAAGCAGCTAGAGGATGTTAGGGCGGAACTTGACAAAAGGATATTCCAAAATTATTATCAAGATCAAGCTATGGAAAAACAAGCTGAAAAGTTGAGGGATGCTTCTAATATGTATGAACACGATAAGAAGTTCTGGGTTGCATCTATTAATGAATTAGAAAGTAAAATAAAGAATATGAAGCGAGAGCATTCTCAACTCTCTTGTGAAGCACATAAATCTGCTAATTCAATTCCTGATTTGAATAAGATGATAATTGCAGTTCAAGCAATTGGCAACATCAGGGTCTTTTGTAGGTGTCGCCCACTTAGTAAGGAAGAGGTAGCGTCTGGTCATGCCACAATTGTAGATTTCACTGCAGCCAAGGATGGAGAGCTTGCAATGCTCACAGGTGGTTCCACAAAGAAAATCTTCAAATTTGACCGGGTTTACACACCAAATGATGATCAAGTTGACATCTCTGCGGATGCCTCACCTATGGTAATTTCGGTGCTAGATGGCTACAATGTCTGTATATTTGCATATGGGCAAACAGGGACAGGAAAAACCTTCACAATGGAAGGTACCAATAAGAACCGAGGAGTCAATTATAGGACTTTGGAGCAGTTGTTTAAGATTGCAGAGGAAAGGAAAGAAATTTTTAAATATACAATATCTGTTAGCGTGCTTGAAGTCTACAATGAGCAAATCAGGGACCTGCTTGCCACTTCGCCAACATCAAAGAAGTTAGAGATAAGGCAAGCAACTGAAGGGGTCCATCATGTACCAGGGATTGTGGAAGCCAAAGTTGAGAACATTAAGGAGGTCTGGGATGTTCTGCAAGCTGGAAGCAATGGAAGGGCTGTAGGATCAAACAATGTGAATGAACACAGTAGCCGATCCCACTGTATGCTCTGCATAATGGTAAGAGCAAAGAATTTGATGAATGGTGAGTGCACAAATAGCAAGCTATGGCTGGTGGATTTGGCAGGCAGTGAGAGGCTAGCTAAAACTGAGGTGCAGGGAGAACGGCTTAAGGAAGCTCAAAACATTAATCGATCACTTTCAGCTCTTGGAGATGTAATATCTGCTTTAGCAACCAAAAGCAGTCATGTACCATACAGGAATTCCAAGCTCACACATTTACTACAAGATTCATTAGGGGGTGATTCAAAAACTTTGATGTTTGTGCAAATCAGTCCTTCAGAACAGGACTTGGGTGAAACTCTAAGTTCATTAAACTTTGCAACTCGAGTTCGAGGGGTGGAGTTAGGTCCTGCCAAGAAGCAGATTGATATGGGTGAGCTTCAAAGGATGAAAATGATGCTTGATAGAGTAAAGCAAGAATCCAACTCAAAAGATGAGGCTTTGCGGAAATTAGAAGAGAACTTTCAGAATTTGGAAGGTAAGGCCAAAAGCAGGGATCAGATTTACAGGAATCAAAAGGAAAAGGTTAATGAACTTGAACTCCAGCTTGAGTCAAAGACAGAGTCATGTAGACAGCTGGAGAAGCAGTTATTGCAACTCTCAGAGGAAGTGAAGAAGAAGGAGGAAATTGGCTTGACGCTCCAGCAAAAGGTCAAGGAACTAGAGAACAAAGTGAAAGAGCACGAGCTTGAGGAGTCCAAGACACACAAGGTCAAGGAGCTTGAAAACAAGTTGAAAGAGAGGACACAAGATTTTGAACTTCATACCAGTATCCTTAAACAAAAGATTAAGGAGCTTGAAAGCAAACTGGTAATGCAAGGCGAAAGCTTAGGATTCCAGTCACTCGAGAAAAAGAACAAGGGGCTTGAAGAAAAGTTGAGACAGCCAACACCAGGTTCTGCTGAGCGGCCAAGAGTTACCCCTAATGAACAAAAAGCCTGGTCAAGAACAGGAACCATGTGCGGCACAGATCCCCAAAGTCTAAGGAGCTTAAACTCTAGTAATGGAGCAATGAGCCAGTCTGGCTTGCTTAAAGGAGCTGATTCACTCCGAGAATTAAGGAGGAAAAGAGAGTTGCAAAGTAAAGGGATTGAGAACAATTTCCTACTGTCAGCTTCTCTAATTGAGCATAAGACCACCCTGCAGAAAGAATCAAATAAGGGTAGACATATCGACCCATCAAAAGCACTGGCCAGGGTTACAAGAATTACAAAACTAGCGACTGCTCAAAGACCCTTATCTAATAACAGAATCAACAGAGAACAACAGGCCACAGGAGTCAAGGAGAGGGACAATCGAACAAGGGTTTGGTCAAGATAG 2637 0.4217 MAPKECESLMSSYKKRRQEKLDIYSIVRANKPLQLVDVRVSVTKDGMITVSFEGVHGSPVINGICIRRAPPLAASEVKHGSIACNNCAAEIELSSAQSKLIRMKFAAKYEKKIEELSGQCQLKSDECYEAWMSLTAANKQLEDVRAELDKRIFQNYYQDQAMEKQAEKLRDASNMYEHDKKFWVASINELESKIKNMKREHSQLSCEAHKSANSIPDLNKMIIAVQAIGNIRVFCRCRPLSKEEVASGHATIVDFTAAKDGELAMLTGGSTKKIFKFDRVYTPNDDQVDISADASPMVISVLDGYNVCIFAYGQTGTGKTFTMEGTNKNRGVNYRTLEQLFKIAEERKEIFKYTISVSVLEVYNEQIRDLLATSPTSKKLEIRQATEGVHHVPGIVEAKVENIKEVWDVLQAGSNGRAVGSNNVNEHSSRSHCMLCIMVRAKNLMNGECTNSKLWLVDLAGSERLAKTEVQGERLKEAQNINRSLSALGDVISALATKSSHVPYRNSKLTHLLQDSLGGDSKTLMFVQISPSEQDLGETLSSLNFATRVRGVELGPAKKQIDMGELQRMKMMLDRVKQESNSKDEALRKLEENFQNLEGKAKSRDQIYRNQKEKVNELELQLESKTESCRQLEKQLLQLSEEVKKKEEIGLTLQQKVKELENKVKEHELEESKTHKVKELENKLKERTQDFELHTSILKQKIKELESKLVMQGESLGFQSLEKKNKGLEEKLRQPTPGSAERPRVTPNEQKAWSRTGTMCGTDPQSLRSLNSSNGAMSQSGLLKGADSLRELRRKRELQSKGIENNFLLSASLIEHKTTLQKESNKGRHIDPSKALARVTRITKLATAQRPLSNNRINREQQATGVKERDNRTRVWSR* 879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0597 878 MobiDBLite consensus disorder prediction 851 878 - -
Vvi18g0597 878 MobiDBLite consensus disorder prediction 727 764 - -
Vvi18g0597 878 PRINTS Kinesin heavy chain signature 502 523 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi18g0597 878 PRINTS Kinesin heavy chain signature 453 471 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi18g0597 878 PRINTS Kinesin heavy chain signature 422 439 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi18g0597 878 PRINTS Kinesin heavy chain signature 304 325 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi18g0597 878 ProSiteProfiles Kinesin motor domain profile. 230 552 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi18g0597 878 MobiDBLite consensus disorder prediction 862 878 - -
Vvi18g0597 878 ProSitePatterns Kinesin motor domain signature. 452 463 IPR019821 GO:0003777|GO:0005524|GO:0007018
Vvi18g0597 878 PANTHER KINESIN-LIKE PROTEIN KLP-3 12 718 IPR027640 GO:0003777|GO:0007018
Vvi18g0597 878 FunFam kinesin-like protein KIN-14R 177 554 - -
Vvi18g0597 878 Gene3D Kinesin motor domain 226 595 IPR036961 -
Vvi18g0597 878 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 230 588 IPR027417 -
Vvi18g0597 878 SMART kinesin_4 228 560 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi18g0597 878 CDD KISc_C_terminal 229 554 - -
Vvi18g0597 878 MobiDBLite consensus disorder prediction 749 764 - -
Vvi18g0597 878 Coils Coil 180 207 - -
Vvi18g0597 878 Coils Coil 106 126 - -
Vvi18g0597 878 Pfam Kinesin motor domain 236 551 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi18g0597 878 Coils Coil 573 690 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0597 Vvi-Chr18 6227907 6234694 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0597 229 606 Calmodulin-binding Proteins AT5G65930 39.687 4.79e-77 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0597 K10406 - vvi:100250527 1638.62